RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 LDHAL6AQ6ZMR3 332 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 TRABD2AQ86V40 505 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 SLC44A2Q8IWA5 706 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-212ENST00000529046 TDRD7Q8NHU6 1098 aaKnown RBP5.35□□□□□ -1.55
CSDE1-212ENST00000529046 PRR11Q96HE9 360 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-212ENST00000529046 MMS19Q96T76 1030 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 HERPUD2Q9BSE4 406 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 CIPCQ9C0C6 399 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 DEFB129Q9H1M3 183 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 SAP30LQ9HAJ7 183 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 GRHPRQ9UBQ7 328 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 HERC5Q9UII4 1024 aaKnown RBP5.35□□□□□ -1.55
CSDE1-212ENST00000529046 NFU1Q9UMS0 254 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 MYH3P11055 1940 aa5.35□□□□□ -1.55
CSDE1-212ENST00000529046 ZNF646O15015 1829 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 PTPRCP08575 1304 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 MROH5Q6ZUA9 1318 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 BTBD19C9JJ37 291 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 PRAMEF2O60811 474 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 CELA2AP08217 269 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 ITGA2BP08514 1039 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 TMIGD3P0DMS9 266 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 MMP8P22894 467 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 CHKAP35790 457 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 KCNJ4P48050 445 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 RENBPP51606 427 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 TNFAIP1Q13829 316 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 CSHL1Q14406 222 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 DHX8Q14562 1220 aaKnown RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 LARS2Q15031 903 aaKnown RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 PDCD2Q16342 344 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 RABL6Q3YEC7 729 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 LRCH2Q5VUJ6 765 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 FBXO46Q6PJ61 603 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 CERS5Q8N5B7 392 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 ATG16L2Q8NAA4 619 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 ZNF398Q8TD17 642 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 TRAPPC12Q8WVT3 735 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 GLMPQ8WWB7 406 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 NPIPB3Q92617 1050 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 P2RY11Q96G91 374 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 RNF26Q9BY78 433 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 SLC29A3Q9BZD2 475 aa5.34□□□□□ -1.55
CSDE1-212ENST00000529046 PABPC3Q9H361 631 aaKnown RBP5.34□□□□□ -1.55
CSDE1-212ENST00000529046 TNRC18O15417 2968 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 CCDC187A0A096LP49 1063 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 hCG_1642624A0A1W2PR95 340 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 TRIM38O00635 465 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 DNPH1O43598 174 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 PIP5K1CO60331 668 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 FAM155BO75949 473 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 MATN1P21941 496 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 KLRK1P26718 216 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 DUSP1P28562 367 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 TXNL4AP83876 142 aaKnown RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 SEMA3BQ13214 749 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 ELF2Q15723 593 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 SRSF7Q16629 238 aaKnown RBP eCLIP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 INO80DQ53TQ3 878 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 TTC22Q5TAA0 569 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 FKBP1CQ5VVH2 108 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 ACSM6Q6P461 480 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 ZNF782Q6ZMW2 699 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 OR52L2PQ8NGH6 319 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 TBC1D22AQ8WUA7 517 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 WDR60Q8WVS4 1066 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 DAZAP1Q96EP5 407 aaKnown RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 FAM84BQ96KN1 310 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 PRMT6Q96LA8 375 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 RTKNQ9BST9 563 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 MXD3Q9BW11 206 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 EPS8L2Q9H6S3 715 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 ZCCHC17Q9NP64 241 aaKnown RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 C9orf78Q9NZ63 289 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 RNF7Q9UBF6 113 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 UBE2J1Q9Y385 318 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 ARHGEF17Q96PE2 2063 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-212ENST00000529046 CASP8AP2Q9UKL3 1982 aa5.33□□□□□ -1.56
CSDE1-212ENST00000529046 LAMB1P07942 1786 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 NBNO60934 754 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 RPP40O75818 363 aaKnown RBP5.32□□□□□ -1.56
CSDE1-212ENST00000529046 USP1O94782 785 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 CER1O95813 267 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 LATS1O95835 1130 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 CHRM5P08912 532 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-212ENST00000529046 NHLRC4P0CG21 123 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-212ENST00000529046 IGFBP2P18065 325 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 DRD1P21728 446 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 CST5P28325 142 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-212ENST00000529046 CCDC15Q0P6D6 951 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 HNRNPA0Q13151 305 aaKnown RBP5.32□□□□□ -1.56
CSDE1-212ENST00000529046 ALDH1L2Q3SY69 923 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 CAVIN4Q5BKX8 364 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 EPHA10Q5JZY3 1008 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 JMJD6Q6NYC1 403 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-212ENST00000529046 NAPRTQ6XQN6 538 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 MOB2Q70IA6 237 aa5.32□□□□□ -1.56
CSDE1-212ENST00000529046 SCAMP5Q8TAC9 235 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms