RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 TRIM31Q9BZY9 425 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 SMARCAD1Q9H4L7 1026 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 CDCP1Q9H5V8 836 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 WDR26Q9H7D7 661 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 USP29Q9HBJ7 922 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 ERVK-5Q9HDB9 667 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 MLXIPLQ9NP71 852 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 DUSP22Q9NRW4 184 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 ASIC5Q9NY37 505 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 MTMR4Q9NYA4 1195 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 EHD2Q9NZN4 543 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 MPP6Q9NZW5 540 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 KLQ9UEF7 1012 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 LIMA1Q9UHB6 759 aaKnown RBP3.52□□□□□ -1.85
CD44-229ENST00000528672 ISY1Q9ULR0 285 aaKnown RBP3.52□□□□□ -1.85
CD44-229ENST00000528672 SH2B3Q9UQQ2 575 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 KCNE2Q9Y6J6 123 aa3.52□□□□□ -1.85
CD44-229ENST00000528672 TEX13CA0A0J9YWL9 993 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 CCDC151A5D8V7 595 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 NPIPB13A6NJU9 1138 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 LRRC3CA6NJW4 275 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 LIPT2A6NK58 231 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 NPIPB5A8MRT5 1133 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 AGAP14A8MT82 685 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 MYO1GB0I1T2 1018 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 NPIPB4C9JG80 1138 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 TGFB1I1O43294 461 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 CCNT1O60563 726 aaKnown RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 HNRNPCL1O60812 293 aaKnown RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 GJB3O75712 270 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 SEC14L2O76054 403 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 C1RP00736 705 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 ADRB2P07550 413 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 CLTBP09497 229 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 ARSAP15289 507 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 FBLP22087 321 aaKnown RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 DUSP1P28562 367 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 TM4SF1P30408 202 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 AVPR2P30518 371 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 NNMTP40261 264 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 PSMB10P40306 273 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 JAK3P52333 1124 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 TPTEP56180 551 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 RAE1P78406 368 aaKnown RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 ROR1Q01973 937 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 SLC20A2Q08357 652 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 WASHC5Q12768 1159 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 LMAN2Q12907 356 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 LRMPQ12912 555 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 CDC16Q13042 620 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 ZNF169Q14929 603 aaPredicted RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 PLCB4Q15147 1175 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 MED22Q15528 200 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 SLC9B1Q4ZJI4 515 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 SH2D4BQ5SQS7 431 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 GPR139Q6DWJ6 353 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 NAA16Q6N069 864 aaPredicted RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 PTCHD4Q6ZW05 846 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 HSCBQ8IWL3 235 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 WDTC1Q8N5D0 677 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 ENDOVQ8N8Q3 282 aaKnown RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 NCSTNQ92542 709 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 JAKMIP2Q96AA8 810 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 PGBD1Q96JS3 809 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 PDLIM2Q96JY6 352 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 PIP5K1AQ99755 562 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 PAIP2Q9BPZ3 127 aaKnown RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 ALG8Q9BVK2 526 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 NPLQ9BXD5 320 aaPredicted RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 KLK15Q9H2R5 256 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 EPHX3Q9H6B9 360 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 TTC12Q9H892 705 aaPredicted RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 ARHGEF3Q9NR81 526 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 SNX15Q9NRS6 342 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 IL1RAPL1Q9NZN1 696 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 C11orf21Q9P2W6 132 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 ZNF70Q9UC06 446 aaPredicted RBP3.51□□□□□ -1.85
CD44-229ENST00000528672 SERGEFQ9UGK8 458 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 SLC25A13Q9UJS0 675 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 ACAD8Q9UKU7 415 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 AMFRQ9UKV5 643 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 ODF2LQ9ULJ1 636 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 GABRQQ9UN88 632 aa3.51□□□□□ -1.85
CD44-229ENST00000528672 ARHGEF17Q96PE2 2063 aaPredicted RBP3.5□□□□□ -1.85
CD44-229ENST00000528672 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.5□□□□□ -1.85
CD44-229ENST00000528672 TTC34A8MYJ7 566 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 H7C0S8 307 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 IFNL4K9M1U5 179 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 MASP2O00187 686 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 PER2O15055 1255 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 MPPED1O15442 326 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 EXOC3O60645 756 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 ERAL1O75616 437 aaKnown RBP3.5□□□□□ -1.85
CD44-229ENST00000528672 C1QL1O75973 258 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 NXPH3O95157 252 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 TUBB4AP04350 444 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 EIF2S1P05198 315 aaKnown RBP3.5□□□□□ -1.85
CD44-229ENST00000528672 NR2F1P10589 423 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 RARGP13631 454 aa3.5□□□□□ -1.85
CD44-229ENST00000528672 GLULP15104 373 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms