RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 NUMBLQ9Y6R0 609 aa5.53□□□□□ -1.52
SVIP-202ENST00000525670 MUC3AQ02505 3323 aa5.53□□□□□ -1.52
SVIP-202ENST00000525670 TTC28Q96AY4 2481 aa5.53□□□□□ -1.52
SVIP-202ENST00000525670 SF3B1O75533 1304 aaKnown RBP eCLIP5.52□□□□□ -1.53
SVIP-202ENST00000525670 DOCK6Q96HP0 2047 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 FAM237AA0A1B0GTK4 181 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 A0A1W2PR48 441 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 PRSS38A1L453 326 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 TGFB1I1O43294 461 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 EXOC3O60645 756 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 RFPL2O75678 378 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 RHOBTB3O94955 611 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 SCAF4O95104 1147 aaKnown RBP5.52□□□□□ -1.53
SVIP-202ENST00000525670 NR3C1P04150 777 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 ALDH2P05091 517 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 RB1P06400 928 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 CNPP09543 421 aaKnown RBP5.52□□□□□ -1.53
SVIP-202ENST00000525670 TMEM191BP0C7N4 346 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 TRIM49P0CI25 452 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 TRIM49CP0CI26 452 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 KLRC2P26717 231 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 PSMD5Q16401 504 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 SNRNP35Q16560 246 aaKnown RBP5.52□□□□□ -1.53
SVIP-202ENST00000525670 DUSP6Q16828 381 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 HSP90AA4PQ58FG1 418 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 CRELD2Q6UXH1 353 aaPredicted RBP5.52□□□□□ -1.53
SVIP-202ENST00000525670 DSTYKQ6XUX3 929 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 EPM2AIP1Q7L775 607 aaPredicted RBP5.52□□□□□ -1.53
SVIP-202ENST00000525670 VRK3Q8IV63 474 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 BRSK2Q8IWQ3 736 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 GPD1LQ8N335 351 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 STKLD1Q8NE28 680 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 ENGASEQ8NFI3 743 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 BEST2Q8NFU1 509 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 OR5B17Q8NGF7 314 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 OR52N2Q8NGI0 321 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 PROKR1Q8TCW9 393 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 RSAD2Q8WXG1 361 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 P2RX5Q93086 422 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 CCDC47Q96A33 483 aaKnown RBP5.52□□□□□ -1.53
SVIP-202ENST00000525670 HVCN1Q96D96 273 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 PGLYRP2Q96PD5 576 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 PYM1Q9BRP8 204 aaKnown RBP5.52□□□□□ -1.53
SVIP-202ENST00000525670 TMEM175Q9BSA9 504 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 NTPCRQ9BSD7 190 aaKnown RBP5.52□□□□□ -1.53
SVIP-202ENST00000525670 MLST8Q9BVC4 326 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 COLEC11Q9BWP8 271 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 STRA6Q9BX79 667 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 MAN1C1Q9NR34 630 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 SPTLC3Q9NUV7 552 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 HS3ST4Q9Y661 456 aa5.52□□□□□ -1.53
SVIP-202ENST00000525670 UBE4BO95155 1302 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 TTC26A0AVF1 554 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 INPPL1O15357 1258 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 EIF3DO15371 548 aaKnown RBP eCLIP5.51□□□□□ -1.53
SVIP-202ENST00000525670 CCL16O15467 120 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 TEX28O15482 410 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 EXTL3O43909 919 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 SOAT2O75908 522 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 SMC2O95347 1197 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 ABHD16AO95870 558 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 CTSAP10619 480 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 KCNE1P15382 129 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 TNNI1P19237 187 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 NR2F2P24468 414 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 ACAT1P24752 427 aaKnown RBP5.51□□□□□ -1.53
SVIP-202ENST00000525670 PRCPP42785 496 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 GZMKP49863 264 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 NRG3P56975 720 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 UBE2HP62256 183 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 DUSP2Q05923 314 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 CYP24A1Q07973 514 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 BIRC3Q13489 604 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 ALCAMQ13740 583 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 TERF2Q15554 542 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 UPP1Q16831 310 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 KNOP1Q1ED39 458 aaKnown RBP5.51□□□□□ -1.53
SVIP-202ENST00000525670 TIGD2Q4W5G0 525 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 C9orf57Q5W0N0 161 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 CD300LGQ6UXG3 332 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 FRMD7Q6ZUT3 714 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 DOK3Q7L591 496 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 CXorf67Q86X51 503 aaPredicted RBP5.51□□□□□ -1.53
SVIP-202ENST00000525670 CREBRFQ8IUR6 639 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 GPT2Q8TD30 523 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 SLC22A17Q8WUG5 538 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 RSPH1Q8WYR4 309 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 PPP2R3CQ969Q6 453 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 KLHL5Q96PQ7 755 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 FNBP1Q96RU3 617 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 NDC1Q9BTX1 674 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 LSM14BQ9BX40 385 aaKnown RBP5.51□□□□□ -1.53
SVIP-202ENST00000525670 CPEB1Q9BZB8 566 aaKnown RBP5.51□□□□□ -1.53
SVIP-202ENST00000525670 LMAN2LQ9H0V9 348 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 KCNH6Q9H252 994 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 ST6GALNAC4Q9H4F1 302 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 TMEM206Q9H813 350 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 MRPL17Q9NRX2 175 aaKnown RBP5.51□□□□□ -1.53
SVIP-202ENST00000525670 SLC38A7Q9NVC3 462 aa5.51□□□□□ -1.53
SVIP-202ENST00000525670 FANCLQ9NW38 375 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms