RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 CYP1A2P05177 515 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 PRKCHP24723 683 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 TNFRSF8P28908 595 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 DEKP35659 375 aaKnown RBP4.34□□□□□ -1.71
CD44-217ENST00000525348 PPP3CCP48454 512 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 ABATP80404 500 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 ZXDBP98169 803 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 GPR18Q14330 331 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 KRT72Q14CN4 511 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 SYTL3Q4VX76 610 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 ZNF585BQ52M93 769 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 DCAF12L2Q5VW00 463 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 TBC1D9BQ66K14 1250 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 Q6ZSV7 163 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 BRSK2Q8IWQ3 736 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 SUGP1Q8IWZ8 645 aaKnown RBP4.34□□□□□ -1.71
CD44-217ENST00000525348 CADM3Q8N126 398 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 FBXL14Q8N1E6 418 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 DPP10Q8N608 796 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 HORMAD2Q8N7B1 307 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 SCAIQ8N9R8 606 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 LINS1Q8NG48 757 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 OR6Y1Q8NGX8 325 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 HDAC7Q8WUI4 952 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 APOLD1Q96LR9 279 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 FRG2BQ96QU4 278 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 TWSG1Q9GZX9 223 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 KLHL31Q9H511 634 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 TMLHEQ9NVH6 421 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 NCKIPSDQ9NZQ3 722 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 HDAC6Q9UBN7 1215 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 CDH22Q9UJ99 828 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 ICKQ9UPZ9 632 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 OSGIN2Q9Y236 505 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 RIPOR2Q9Y4F9 1068 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 RAI2Q9Y5P3 530 aa4.34□□□□□ -1.71
CD44-217ENST00000525348 MST1RQ04912 1400 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 CLEC18AA5D8T8 446 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 C4orf47A7E2U8 309 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 B9A039 149 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 SPRY3O43610 288 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 TFRCP02786 760 aaKnown RBP4.33□□□□□ -1.72
CD44-217ENST00000525348 CYP4B1P13584 511 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 CPA1P15085 419 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 CDC25AP30304 524 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 ADD2P35612 726 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 MVDP53602 400 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 Q0VFX4 171 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 INO80DQ53TQ3 878 aaPredicted RBP4.33□□□□□ -1.72
CD44-217ENST00000525348 FAM83BQ5T0W9 1011 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 FAM185AQ8N0U4 392 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 FSIP1Q8NA03 581 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 CLEC18CQ8NCF0 446 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 FAR1Q8WVX9 515 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 GOLGA1Q92805 767 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 NEUROG1Q92886 237 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 THOC3Q96J01 351 aaKnown RBP4.33□□□□□ -1.72
CD44-217ENST00000525348 SF3B5Q9BWJ5 86 aaKnown RBP4.33□□□□□ -1.72
CD44-217ENST00000525348 CADM1Q9BY67 442 aaKnown RBP4.33□□□□□ -1.72
CD44-217ENST00000525348 DCLK3Q9C098 648 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.33□□□□□ -1.72
CD44-217ENST00000525348 MYO6Q9UM54 1294 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 RAP2CQ9Y3L5 183 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 SLC4A4Q9Y6R1 1079 aa4.33□□□□□ -1.72
CD44-217ENST00000525348 TARSL2A2RTX5 802 aaKnown RBP4.32□□□□□ -1.72
CD44-217ENST00000525348 DDTLA6NHG4 134 aaPredicted RBP4.32□□□□□ -1.72
CD44-217ENST00000525348 LDB2O43679 373 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 CLDN7O95471 211 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 HLA-DQA2P01906 255 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 AVPR1AP37288 418 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 MLH1P40692 756 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 PNPLA4P41247 253 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 MTNR1AP48039 350 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 RPS6KA3P51812 740 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 RBM5P52756 815 aaKnown RBP eCLIP4.32□□□□□ -1.72
CD44-217ENST00000525348 ZP1P60852 638 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 ROR2Q01974 943 aaKnown RBP4.32□□□□□ -1.72
CD44-217ENST00000525348 THOC5Q13769 683 aaKnown RBP4.32□□□□□ -1.72
CD44-217ENST00000525348 HNF4GQ14541 408 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 ZNF284Q2VY69 593 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 SLC4A8Q2Y0W8 1093 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 TMED8Q6PL24 325 aaPredicted RBP4.32□□□□□ -1.72
CD44-217ENST00000525348 RINLQ6ZS11 566 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 ZNF367Q7RTV3 350 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 CAMK1DQ8IU85 385 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 ENAHQ8N8S7 591 aaPredicted RBP4.32□□□□□ -1.72
CD44-217ENST00000525348 CEP76Q8TAP6 659 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 TRAPPC12Q8WVT3 735 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 ADAMTS14Q8WXS8 1223 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 THAP4Q8WY91 577 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 TMEM204Q9BSN7 226 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 CHODLQ9H9P2 273 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 PTPRHQ9HD43 1115 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 NOTCH4Q99466 2003 aa4.32□□□□□ -1.72
CD44-217ENST00000525348 HSPB6O14558 160 aa4.31□□□□□ -1.72
CD44-217ENST00000525348 ACAA1P09110 424 aaPredicted RBP4.31□□□□□ -1.72
CD44-217ENST00000525348 T-ENOLP0DO92 83 aa4.31□□□□□ -1.72
CD44-217ENST00000525348 THPOP40225 353 aa4.31□□□□□ -1.72
CD44-217ENST00000525348 PTPN9P43378 593 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms