RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 MCF2LO15068 1137 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 EPN2O95208 641 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 CTSLP07711 333 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 DESP17661 470 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 AMPD1P23109 780 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 DRD3P35462 400 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 ARHGAP25P42331 645 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 PTGER3P43115 390 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 SERPINH1P50454 418 aaKnown RBP12.21□□□□□ -0.45
CLN8-207ENST00000524258 CLCN6P51797 869 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 NDST2P52849 883 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 POLD3Q15054 466 aaPredicted RBP12.21□□□□□ -0.45
CLN8-207ENST00000524258 SPDYCQ5MJ68 293 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 PLA2G2CQ5R387 149 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 KIAA1324Q6UXG2 1013 aaKnown RBP12.21□□□□□ -0.45
CLN8-207ENST00000524258 Q6ZVU0 165 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 SLC41A1Q8IVJ1 513 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 AADATQ8N5Z0 425 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 SPC24Q8NBT2 197 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 NETO2Q8NC67 525 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 RUBCNQ92622 972 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 PRCCQ92733 491 aaPredicted RBP12.21□□□□□ -0.45
CLN8-207ENST00000524258 FAF2Q96CS3 445 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 ZNF419Q96HQ0 510 aaPredicted RBP12.21□□□□□ -0.45
CLN8-207ENST00000524258 SLC39A8Q9C0K1 460 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 LACRTQ9GZZ8 138 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 PABPC3Q9H361 631 aaKnown RBP12.21□□□□□ -0.45
CLN8-207ENST00000524258 CATSPERBQ9H7T0 1116 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 PDFQ9HBH1 243 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.21□□□□□ -0.45
CLN8-207ENST00000524258 SLC25A13Q9UJS0 675 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 NUP205Q92621 2012 aa12.21□□□□□ -0.46
CLN8-207ENST00000524258 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 A0A0A6YYK5 440 aaPredicted RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 A0A0U1RQJ8 604 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 BCLAF3A2AJT9 711 aaKnown RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 MID1O15344 667 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 PJA2O43164 708 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 CD6P30203 668 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 CYLC1P35663 651 aaPredicted RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 ETFBP38117 255 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 MMRN1Q13201 1228 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 BYSLQ13895 437 aaKnown RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 ELAVL3Q14576 367 aaKnown RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 MESDQ14696 234 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 CST6Q15828 149 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 PARP15Q460N3 678 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 PPP6R3Q5H9R7 873 aaPredicted RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 PEAR1Q5VY43 1037 aaPredicted RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 ZNF776Q68DI1 518 aaPredicted RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 C22orf39Q6P5X5 142 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 C11orf74Q86VG3 221 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 MMAAQ8IVH4 418 aaKnown RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 TMEFF1Q8IYR6 380 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 ATP11CQ8NB49 1132 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 CHST14Q8NCH0 376 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 RAPGEF5Q92565 580 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 HSPH1Q92598 858 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 ISG20Q96AZ6 181 aaKnown RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 TOE1Q96GM8 510 aaKnown RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 CELF6Q96J87 481 aaKnown RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 BAG1Q99933 345 aaPredicted RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 CEP44Q9C0F1 390 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 RCOR3Q9P2K3 495 aaPredicted RBP12.2□□□□□ -0.46
CLN8-207ENST00000524258 LCMT1Q9UIC8 334 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 DUSP10Q9Y6W6 482 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 SPTBN4Q9H254 2564 aa12.2□□□□□ -0.46
CLN8-207ENST00000524258 BTNL10A8MVZ5 291 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 H3BRJ5 948 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 J3KR12 359 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 ALOX15BO15296 676 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 BUB1BO60566 1050 aaPredicted RBP12.19□□□□□ -0.46
CLN8-207ENST00000524258 PRAMEF11O60813 436 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 PEX11BO96011 259 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 SLC8A1P32418 973 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 ACSL1P33121 698 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 NNMTP40261 264 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 PAPOLAP51003 745 aaKnown RBP12.19□□□□□ -0.46
CLN8-207ENST00000524258 CYTH1Q15438 398 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 LRRC38Q5VT99 294 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 IL31Q6EBC2 164 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 RETSATQ6NUM9 610 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 SLC36A4Q6YBV0 504 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 LEKR1Q6ZMV7 388 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 DPY19L3Q6ZPD9 716 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 ARHGAP36Q6ZRI8 547 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 USP30Q70CQ3 517 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 CACUL1Q86Y37 369 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 PCDH20Q8N6Y1 951 aaKnown RBP12.19□□□□□ -0.46
CLN8-207ENST00000524258 PQLC3Q8N755 202 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 ACRBPQ8NEB7 543 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 PCDH19Q8TAB3 1148 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 C1orf216Q8TAB5 229 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 SPACA7Q96KW9 195 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 ORAI3Q9BRQ5 295 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 TNKS2Q9H2K2 1166 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 TMEM74BQ9NUR3 256 aa12.19□□□□□ -0.46
CLN8-207ENST00000524258 FCF1Q9Y324 198 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms