RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 IPMKQ8NFU5 416 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 CYB5D2Q8WUJ1 264 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 SPATA13Q96N96 652 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 NECTIN4Q96NY8 510 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 NEUROG2Q9H2A3 272 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 ETNK1Q9HBU6 452 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 PAK5Q9P286 719 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 DOCK8Q8NF50 2099 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 CCDC78A2IDD5 438 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 LATS1O95835 1130 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 MMP13P45452 471 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 YBEYP58557 167 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 SERINC3Q13530 473 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 PRKD1Q15139 912 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 ANKRD22Q5VYY1 191 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 TIGD7Q6NT04 549 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 FBXO38Q6PIJ6 1188 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 ATP2A3Q93084 1043 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 FMO2Q99518 471 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 C2orf49Q9BVC5 232 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 CINPQ9BW66 212 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 MAGEH1Q9H213 219 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 ECT2Q9H8V3 914 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 KIAA1522Q9P206 1035 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 UBA2Q9UBT2 640 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 MYO10Q9HD67 2058 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 NCOR1O75376 2440 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 TCRBV7S3A2A0A539 114 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 ILVBLA1L0T0 632 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 TBC1D3BA6NDS4 549 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 ERLIN1O75477 346 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 SLC4A1P02730 911 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 HLA-DQB2P05538 268 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 POU2F2P09086 479 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 FAM153BP0C7A2 387 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 CTSOP43234 321 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 FAM193AP78312 1265 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 EML3Q32P44 896 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 FAM153CQ494X1 144 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 TEX44Q53QW1 395 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 DUPD1Q68J44 220 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 CASC4Q6P4E1 433 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 CHST9Q7L1S5 443 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 SETD3Q86TU7 594 aaPredicted RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 C12orf40Q86WS4 652 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 CACUL1Q86Y37 369 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 CPXM2Q8N436 756 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 DNAAF3Q8N9W5 541 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 XPO6Q96QU8 1125 aaKnown RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 TNKS2Q9H2K2 1166 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 FAM114A2Q9NRY5 505 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 MTRF1LQ9UGC7 380 aaKnown RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 FAM153AQ9UHL3 310 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 VPS51Q9UID3 782 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
SDCBP-212ENST00000523483 ATP8A1Q9Y2Q0 1164 aa9.53□□□□□ -0.88
SDCBP-212ENST00000523483 MATN3O15232 486 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 TULP3O75386 442 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 BANF1O75531 89 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 SLC6A11P48066 632 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 DGKGP49619 791 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 RENBPP51606 427 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 MESP2Q0VG99 397 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 LBRQ14739 615 aaKnown RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 PLEKHG6Q3KR16 790 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 PTCRAQ6ISU1 281 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 BBS5Q8N3I7 341 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 ZNF419Q96HQ0 510 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 RBM15Q96T37 977 aaKnown RBP eCLIP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 ZNF212Q9UDV6 495 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 STOML2Q9UJZ1 356 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 OBSL1O75147 1896 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 TARSL2A2RTX5 802 aaKnown RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 AVILO75366 819 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 PABPC1P11940 636 aaKnown RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 FCARP24071 287 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 CCNCP24863 283 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 SESN2P58004 480 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 RHOAP61586 193 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 DSC2Q02487 901 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 NR1H3Q13133 447 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 GEN1Q17RS7 908 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 SKIDA1Q1XH10 827 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 BBS9Q3SYG4 887 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.89
SDCBP-212ENST00000523483 MFSD6LQ8IWD5 586 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 CNTD1Q8N815 330 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 CCHCR1Q8TD31 782 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 FSD1LQ9BXM9 530 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 DEC1Q9P2X7 70 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 GGA2Q9UJY4 613 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 TBC1D30Q9Y2I9 924 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 WASH4PA8MWX3 477 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 MTSS1O43312 755 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 MBTPS2O43462 519 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 OPHN1O60890 802 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 MCM3P25205 808 aa9.52□□□□□ -0.89
SDCBP-212ENST00000523483 CD86P42081 329 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms