RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 RAPGEF1Q13905 1077 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 SETMARQ53H47 684 aaPredicted RBP15.81■□□□□ 0.12
MRPS28-209ENST00000522987 ZNF542PQ5EBM4 170 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 PIP5KL1Q5T9C9 394 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 SLC26A9Q7LBE3 791 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 KANSL1Q7Z3B3 1105 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 TMC6Q7Z403 805 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 NXPE2Q96DL1 559 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 KLHDC7BQ96G42 594 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 NPY6RQ99463 290 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 SPON2Q9BUD6 331 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 CALN1Q9BXU9 219 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 WDCPQ9H6R7 721 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 UCKL1Q9NWZ5 548 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.81■□□□□ 0.12
MRPS28-209ENST00000522987 PCDHGA1Q9Y5H4 931 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 ACTL7AQ9Y615 435 aa15.81■□□□□ 0.12
MRPS28-209ENST00000522987 LOC400499M0QZD8 3231 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 YKT6O15498 198 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 SLC7A4O43246 635 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 SIGLEC6O43699 453 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 SRGAP2O75044 1071 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 PCDH8O95206 1070 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 THEGLP0DJG4 465 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 ABCG1P45844 678 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 RXRGP48443 463 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 C6orf118Q5T5N4 469 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 FAM102AQ5T9C2 384 aaPredicted RBP15.8■□□□□ 0.12
MRPS28-209ENST00000522987 SFMBT2Q5VUG0 894 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 SEL1L3Q68CR1 1132 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 FBXL19Q6PCT2 694 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 KDM7AQ6ZMT4 941 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 PHLDB2Q86SQ0 1253 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 TRIM69Q86WT6 500 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 OR2A12Q8NGT7 310 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 TSC1Q92574 1164 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 FAM131CQ96AQ9 280 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 FAM81BQ96LP2 452 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 SCUBE2Q9NQ36 999 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 DMTF1Q9Y222 760 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 TBC1D30Q9Y2I9 924 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 FHOD1Q9Y613 1164 aa15.8■□□□□ 0.12
MRPS28-209ENST00000522987 KIF26BQ2KJY2 2108 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 LRRK1Q38SD2 2015 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 CHD5Q8TDI0 1954 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 PRAMEF26H0Y7S4 382 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 PRB1P04280 392 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 PRKCSHP14314 528 aaPredicted RBP15.79■□□□□ 0.12
MRPS28-209ENST00000522987 CKMT2P17540 419 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 EIF2S3P41091 472 aaKnown RBP15.79■□□□□ 0.12
MRPS28-209ENST00000522987 CXCR3P49682 368 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 DNA2P51530 1060 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 KRT83P78385 493 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 DAB2P98082 770 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
MRPS28-209ENST00000522987 DRAP1Q14919 205 aaPredicted RBP15.79■□□□□ 0.12
MRPS28-209ENST00000522987 RAB6CQ53S08 254 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 ARSIQ5FYB1 569 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 TRNP1Q6NT89 227 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 C22orf39Q6P5X5 142 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 ZNF683Q8IZ20 524 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 SLC25A45Q8N413 288 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 OXR1Q8N573 874 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 OR13H1Q8NG92 308 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 PPP1R9BQ96SB3 815 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 C2orf49Q9BVC5 232 aaPredicted RBP15.79■□□□□ 0.12
MRPS28-209ENST00000522987 RAB6CQ9H0N0 254 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 KDM4CQ9H3R0 1056 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 ERVMER34-1Q9H9K5 563 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 PREBQ9HCU5 417 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 DYRK4Q9NR20 520 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 ARHGEF38Q9NXL2 777 aa15.79■□□□□ 0.12
MRPS28-209ENST00000522987 ZFR2Q9UPR6 939 aaKnown RBP15.79■□□□□ 0.12
MRPS28-209ENST00000522987 FARP1Q9Y4F1 1045 aaPredicted RBP15.79■□□□□ 0.12
MRPS28-209ENST00000522987 EIF4E1BA6NMX2 242 aaKnown RBP15.78■□□□□ 0.12
MRPS28-209ENST00000522987 ALOX15BO15296 676 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 FLT3P36888 993 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 MAN2A1Q16706 1144 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 PROX2Q3B8N5 592 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 DPY19L3Q6ZPD9 716 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 FAM131BQ86XD5 332 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 DRC7Q8IY82 874 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 TMEM35BQ8NCS4 154 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 ZNF397Q8NF99 534 aaPredicted RBP15.78■□□□□ 0.12
MRPS28-209ENST00000522987 CFAP57Q96MR6 1250 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 STAP1Q9ULZ2 295 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 HS3ST2Q9Y278 367 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 RAI2Q9Y5P3 530 aa15.78■□□□□ 0.12
MRPS28-209ENST00000522987 A0A087WV48 116 aa15.77■□□□□ 0.12
MRPS28-209ENST00000522987 GTPBP10A4D1E9 387 aaKnown RBP15.77■□□□□ 0.12
MRPS28-209ENST00000522987 E9PAM4 449 aa15.77■□□□□ 0.12
MRPS28-209ENST00000522987 MAGEC1O60732 1142 aa15.77■□□□□ 0.12
MRPS28-209ENST00000522987 LEFTY1O75610 366 aa15.77■□□□□ 0.12
MRPS28-209ENST00000522987 C1SP09871 688 aa15.77■□□□□ 0.12
MRPS28-209ENST00000522987 DGKAP23743 735 aa15.77■□□□□ 0.12
MRPS28-209ENST00000522987 OR1E1P30953 314 aa15.77■□□□□ 0.12
MRPS28-209ENST00000522987 GKP32189 559 aa15.77■□□□□ 0.12
MRPS28-209ENST00000522987 VASPP50552 380 aaPredicted RBP15.77■□□□□ 0.12
MRPS28-209ENST00000522987 INSM1Q01101 510 aaPredicted RBP15.77■□□□□ 0.12
MRPS28-209ENST00000522987 KCNMA1Q12791 1236 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms