RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 LSM12Q3MHD2 195 aaKnown RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 KIAA1755Q5JYT7 1200 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 TMEM81Q6P7N7 255 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 PCSK4Q6UW60 755 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 TRIM72Q6ZMU5 477 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 CPLX4Q7Z7G2 160 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 RASAL3Q86YV0 1011 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 CNTROBQ8N137 903 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 WDTC1Q8N5D0 677 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 TMEM217Q8N7C4 229 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 PDILTQ8N807 584 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 SCAIQ8N9R8 606 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 ADPRHL1Q8NDY3 354 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 ETNPPLQ8TBG4 499 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 ZFPM2Q8WW38 1151 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 LARP4BQ92615 738 aaKnown RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 CUL5Q93034 780 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 STRA6Q9BX79 667 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 ZNF341Q9BYN7 854 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 KRT84Q9NSB2 600 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 ATP8A2Q9NTI2 1148 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 HCFC1R1Q9NWW0 138 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 ALKBH4Q9NXW9 302 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 FBXO4Q9UKT5 387 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 INTS6Q9UL03 887 aaKnown RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 hCG_1807616A0A1W2PRN6 198 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TCRBV7S3A2A0A539 114 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 FRMD3A2A2Y4 597 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 FAM90A8PA6NJQ4 464 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TTC34A8MYJ7 566 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TMEM232C9JQI7 657 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 LIASO43766 372 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 EXOC3O60645 756 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 PAGE4O60829 102 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TACC1O75410 805 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ERAL1O75616 437 aaKnown RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TIPRLO75663 272 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 SEC31AO94979 1220 aaKnown RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 DDAH2O95865 285 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ADAP00813 363 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 FAM90A13PP0C7W8 464 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 FAM90A24PP0C7X0 464 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 NR2F1P10589 423 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 FCGR2AP12318 317 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 RARGP13631 454 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 HOXA7P31268 230 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 CPOXP36551 454 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 PBX3P40426 434 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 VPS41P49754 854 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 NAP1L1P55209 391 aaKnown RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 NLRP5P59047 1200 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARF3P61204 181 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARF1P84077 181 aaKnown RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TFF2Q03403 129 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 KCNB1Q14721 858 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 CCDC96Q2M329 555 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ZKSCAN2Q63HK3 967 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TXNDC8Q6A555 127 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 CYP20A1Q6UW02 462 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 RANBP10Q6VN20 620 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 PRSS45Q7RTY3 260 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 KRT77Q7Z794 578 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 LCORLQ8N3X6 602 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 CPXM2Q8N436 756 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TTC39CQ8N584 583 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 HDAC7Q8WUI4 952 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 KAT2AQ92830 837 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 RITA1Q96K30 269 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 KLHL15Q96M94 604 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 WDFY2Q96P53 400 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 MAP7D2Q96T17 732 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 NUDT16L1Q9BRJ7 211 aaKnown RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ABHD14AQ9BUJ0 271 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 TOR3AQ9H497 397 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 PLEKHA4Q9H4M7 779 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 SLC32A1Q9H598 525 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 POLR1BQ9H9Y6 1135 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 C20orf141Q9NUB4 165 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 HAUS2Q9NVX0 235 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ARL15Q9NXU5 204 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 NCKIPSDQ9NZQ3 722 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ABI3Q9P2A4 366 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 PEMTQ9UBM1 199 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ADD3Q9UEY8 706 aaKnown RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 ICKQ9UPZ9 632 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 HEMK1Q9Y5R4 338 aaPredicted RBP3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 LYVE1Q9Y5Y7 322 aa3.7□□□□□ -1.82
HMGN1P28-201ENST00000521340 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 OR6C68A6NDL8 312 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 A8MZ25 164 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 TARM1B6A8C7 271 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 VILLO15195 856 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 CEP104O60308 925 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 SEC14L2O76054 403 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 SERPINC1P01008 464 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 EIF2S1P05198 315 aaKnown RBP3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 EDN2P20800 178 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 PSMB10P40306 273 aa3.69□□□□□ -1.82
HMGN1P28-201ENST00000521340 PSMC6P62333 389 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms