RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 FBXO43Q4G163 708 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 NAPEPLDQ6IQ20 393 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 RETSATQ6NUM9 610 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 SLC22A25Q6T423 547 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 MMS22LQ6ZRQ5 1243 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 ADGRG6Q86SQ4 1221 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 HEATR4Q86WZ0 1026 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 SLC25A41Q8N5S1 370 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 PAF1Q8N7H5 531 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 LRRC57Q8N9N7 239 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 DNAAF1Q8NEP3 725 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 TMEM174Q8WUU8 243 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 CNOT9Q92600 299 aaKnown RBP5.55□□□□□ -1.52
SKP1-208ENST00000521216 HTRA1Q92743 480 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 VOPP1Q96AW1 172 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 SH3KBP1Q96B97 665 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 TBATAQ96M53 351 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 DECR2Q9NUI1 292 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 HDAC6Q9UBN7 1215 aa5.55□□□□□ -1.52
SKP1-208ENST00000521216 PLEKHB1Q9UF11 243 aaPredicted RBP5.55□□□□□ -1.52
SKP1-208ENST00000521216 CNOT7Q9UIV1 285 aaKnown RBP5.55□□□□□ -1.52
SKP1-208ENST00000521216 ZNF521Q96K83 1311 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 A0A0A0MQY5 61 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 TMEM272A0A1B0GTI8 110 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 TLX3O43711 291 aaPredicted RBP5.54□□□□□ -1.52
SKP1-208ENST00000521216 TMCC1O94876 653 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 DDAH2O95865 285 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 UBAP2Q5T6F2 1119 aaKnown RBP5.54□□□□□ -1.52
SKP1-208ENST00000521216 NUGGCQ68CJ6 796 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 GJB7Q6PEY0 223 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 LVRNQ6Q4G3 990 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 LRRC8DQ7L1W4 858 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 KDELC2Q7Z4H8 507 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 WDR5BQ86VZ2 330 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 TMTC1Q8IUR5 882 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 FAM217AQ8IXS0 508 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 FAM185AQ8N0U4 392 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 ARFGAP1Q8N6T3 406 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 NRACQ8N912 160 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 SETD9Q8NE22 299 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 RUFY2Q8WXA3 655 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 HSPH1Q92598 858 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 TEFMQ96QE5 360 aaKnown RBP5.54□□□□□ -1.52
SKP1-208ENST00000521216 FRG2BQ96QU4 278 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.54□□□□□ -1.52
SKP1-208ENST00000521216 SLC32A1Q9H598 525 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 CXorf56Q9H5V9 222 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 NLKQ9UBE8 527 aa5.54□□□□□ -1.52
SKP1-208ENST00000521216 COL3A1P02461 1466 aaPredicted RBP5.53□□□□□ -1.52
SKP1-208ENST00000521216 TRBV5-7A0A0A0MS05 114 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 A0A0G2JK05 382 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 DDTLA6NHG4 134 aaPredicted RBP5.53□□□□□ -1.52
SKP1-208ENST00000521216 EYA2O00167 538 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 GUCY1B2O75343 617 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 SYF2O95926 243 aaKnown RBP5.53□□□□□ -1.52
SKP1-208ENST00000521216 TMEM191BP0C7N4 346 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 PSMC2P35998 433 aaKnown RBP5.53□□□□□ -1.52
SKP1-208ENST00000521216 ALDH7A1P49419 539 aaKnown RBP5.53□□□□□ -1.52
SKP1-208ENST00000521216 TUBP50607 506 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 VAMP2P63027 116 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 SLC18A3Q16572 532 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 SYTL3Q4VX76 610 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 GPSM1Q86YR5 675 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 TMEM199Q8N511 208 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 MSI2Q96DH6 328 aaKnown RBP5.53□□□□□ -1.52
SKP1-208ENST00000521216 EYA3Q99504 573 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 PHF7Q9BWX1 381 aaPredicted RBP5.53□□□□□ -1.52
SKP1-208ENST00000521216 PNRC2Q9NPJ4 139 aaKnown RBP5.53□□□□□ -1.52
SKP1-208ENST00000521216 WASH6PQ9NQA3 447 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 POT1Q9NUX5 634 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 PDP2Q9P2J9 529 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 SLC13A4Q9UKG4 626 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 ARHGAP26Q9UNA1 814 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 OSGIN2Q9Y236 505 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 CNPY2Q9Y2B0 182 aa5.53□□□□□ -1.52
SKP1-208ENST00000521216 FAM90A7PA6NKC0 464 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 FAM90A22PA8MWA6 464 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 FAM90A12PA8MX19 464 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 FAM90A23PA8MXZ1 464 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 SOCS2O14508 198 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 PER2O15055 1255 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 TULP3O75386 442 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 PAX3P23760 479 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 CLCNKBP51801 687 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 RPP30P78346 268 aaKnown RBP5.52□□□□□ -1.53
SKP1-208ENST00000521216 GPR68Q15743 365 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 C11orf87Q6NUJ2 197 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 COLCA1Q6ZS62 124 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 PIP4P1Q86T03 277 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 MMP21Q8N119 569 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 LSM14AQ8ND56 463 aaKnown RBP5.52□□□□□ -1.53
SKP1-208ENST00000521216 RFWD2Q8NHY2 731 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 SLC25A28Q96A46 364 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 NLRP4Q96MN2 994 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 TMEM79Q9BSE2 394 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 LMAN2LQ9H0V9 348 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 TTYH1Q9H313 450 aaPredicted RBP5.52□□□□□ -1.53
SKP1-208ENST00000521216 EPHX3Q9H6B9 360 aa5.52□□□□□ -1.53
SKP1-208ENST00000521216 SEMA4BQ9NPR2 832 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms