RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TRMT61AQ96FX7 289 aaKnown RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 KAZALD1Q96I82 304 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 BARD1Q99728 777 aaKnown RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 PDCL3Q9H2J4 239 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 EBF3Q9H4W6 596 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 ACAD9Q9H845 621 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 PDE11AQ9HCR9 933 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 NKIRAS2Q9NYR9 191 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 SEMA5BQ9P283 1151 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 TRPC5Q9UL62 973 aaPredicted RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 PCDHA10Q9Y5I2 948 aa4.43□□□□□ -1.7
SQLE-204ENST00000520493 HEMK1Q9Y5R4 338 aaPredicted RBP4.43□□□□□ -1.7
SQLE-204ENST00000520493 A0A1W2PPH5 198 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 FSD2A1L4K1 749 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 PGPEP1LA6NFU8 196 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 H3BNX3 289 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 M0QYT0 321 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 DHX16O60231 1041 aaKnown RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 USO1O60763 962 aaKnown RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 OAZ2O95190 189 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 METTL18O95568 372 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 PLAUP00749 431 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 ALADP13716 330 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 CPA1P15085 419 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 RRM1P23921 792 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 FAM3BP58499 235 aaPredicted RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 SRSF1Q07955 248 aaKnown RBP eCLIP4.42□□□□□ -1.7
SQLE-204ENST00000520493 CCNG2Q16589 344 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 C16orf89Q6UX73 402 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 ZNF517Q6ZMY9 492 aaPredicted RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 GALNT5Q7Z7M9 940 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.42□□□□□ -1.77e-8■■■■■ 27.2
SQLE-204ENST00000520493 LAS2Q8IYD9 372 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 ENDOVQ8N8Q3 282 aaKnown RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 LSM14AQ8ND56 463 aaKnown RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 PIGKQ92643 395 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 MASTLQ96GX5 879 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 RBM17Q96I25 401 aaKnown RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 APOPT1Q96IL0 206 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 ZFYVE19Q96K21 471 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 CD180Q99467 661 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 PRKRIP1Q9H875 184 aaPredicted RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 SAP30LQ9HAJ7 183 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 SLC22A11Q9NSA0 550 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 HCN3Q9P1Z3 774 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 ORC3Q9UBD5 711 aaPredicted RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 HEY2Q9UBP5 337 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 RAB21Q9UL25 225 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 SIRT4Q9Y6E7 314 aaPredicted RBP4.42□□□□□ -1.7
SQLE-204ENST00000520493 SQORQ9Y6N5 450 aa4.42□□□□□ -1.7
SQLE-204ENST00000520493 TSPAN4O14817 238 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 PLOD3O60568 738 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 F9P00740 461 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 ACP5P13686 325 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 ABCD3P28288 659 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 HOXD12P35452 270 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 VPS41P49754 854 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 TAS2R50P59544 299 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 RPP30P78346 268 aaKnown RBP4.41□□□□□ -1.7
SQLE-204ENST00000520493 RAE1P78406 368 aaKnown RBP4.41□□□□□ -1.7
SQLE-204ENST00000520493 RNASELQ05823 741 aaKnown RBP4.41□□□□□ -1.7
SQLE-204ENST00000520493 GOLGA8FQ08AF8 430 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 MEA1Q16626 185 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 GLE1Q53GS7 698 aaKnown RBP4.41□□□□□ -1.7
SQLE-204ENST00000520493 SLC39A5Q6ZMH5 540 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 TMTC3Q6ZXV5 915 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 ANKRD23Q86SG2 305 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 LSMEM1Q8N8F7 131 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 ANKRD52Q8NB46 1076 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 NFKBIDQ8NI38 313 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 BCAS4Q8TDM0 211 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 VCPIP1Q96JH7 1222 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 TIGD1Q96MW7 591 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 TTC14Q96N46 770 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 FCRL5Q96RD9 977 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 HTATIP2Q9BUP3 242 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 CCDC68Q9H2F9 335 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 ABHD10Q9NUJ1 306 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 BEX4Q9NWD9 120 aaPredicted RBP4.41□□□□□ -1.7
SQLE-204ENST00000520493 TBC1D14Q9P2M4 693 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 SLC25A10Q9UBX3 287 aaPredicted RBP4.41□□□□□ -1.7
SQLE-204ENST00000520493 NOL7Q9UMY1 257 aaKnown RBP4.41□□□□□ -1.7
SQLE-204ENST00000520493 VPS4AQ9UN37 437 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 GPR34Q9UPC5 381 aa4.41□□□□□ -1.7
SQLE-204ENST00000520493 COPG1Q9Y678 874 aaKnown RBP4.41□□□□□ -1.7
SQLE-204ENST00000520493 A0A1W2PRQ8 180 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 PI4KAP2A4QPH2 592 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 AGAP5A6NIR3 686 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 SH2D7A6NKC9 451 aaPredicted RBP4.4□□□□□ -1.71
SQLE-204ENST00000520493 SCGB1D1O95968 90 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 MBPP02686 304 aaPredicted RBP4.4□□□□□ -1.71
SQLE-204ENST00000520493 TKTP29401 623 aaKnown RBP4.4□□□□□ -1.71
SQLE-204ENST00000520493 PAFAH1B1P43034 410 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 RPS6KA3P51812 740 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 DRG2P55039 364 aaKnown RBP4.4□□□□□ -1.71
SQLE-204ENST00000520493 GALNT2Q10471 571 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 PTP4A2Q12974 167 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 MTA1Q13330 715 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 KRT32Q14532 448 aa4.4□□□□□ -1.71
SQLE-204ENST00000520493 KLHL22Q53GT1 634 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms