RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ALAS2P22557 587 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SLC5A2P31639 672 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 LONP1P36776 959 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CD97P48960 835 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 PGFP49763 221 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 KIF11P52732 1056 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 AP3M2P53677 418 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SNRPFP62306 86 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CCDC15Q0P6D6 951 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 EFEMP1Q12805 493 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 KCNAB2Q13303 367 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ZNF177Q13360 481 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SPIDRQ14159 915 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ELAVL3Q14576 367 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 TBR1Q16650 682 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 OXLD1Q5BKU9 147 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 PRRT3Q5FWE3 981 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ZNF667Q5HYK9 610 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 NKAPLQ5M9Q1 402 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ADGRF1Q5T601 910 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SAMD5Q5TGI4 173 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 FAM46CQ5VWP2 391 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CLEC20AQ6ZU45 233 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 RSRC2Q7L4I2 434 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 MMAAQ8IVH4 418 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CCDC117Q8IWD4 279 aaPredicted RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CRYBG2Q8N1P7 616 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ZNF366Q8N895 744 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ZSWIM2Q8NEG5 633 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ZMIZ2Q8NF64 920 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SLC2A14Q8TDB8 520 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 TTC17Q96AE7 1141 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 FAM131CQ96AQ9 280 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 TMEM159Q96B96 161 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 TMA16Q96EY4 203 aaKnown RBP5.06□□□□□ -1.6
SDCBP-207ENST00000520168 P2RY11Q96G91 374 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CATSPER2Q96P56 530 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CGRRF1Q99675 332 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CBWD1Q9BRT8 395 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 B3GNT4Q9C0J1 378 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 PREBQ9HCU5 417 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 OSER1Q9NX31 292 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 MARCH2Q9P0N8 246 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 ARHGAP20Q9P2F6 1191 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SERGEFQ9UGK8 458 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CYTH4Q9UIA0 394 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 RASAL2Q9UJF2 1139 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SALL4Q9UJQ4 1053 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CLEC4EQ9ULY5 219 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 SRPK3Q9UPE1 567 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 USP3Q9Y6I4 520 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 TRPM6Q9BX84 2022 aa5.06□□□□□ -1.6
SDCBP-207ENST00000520168 CSMD2Q7Z408 3487 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 ELOA3CA0A087WX78 387 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 LY6G6EA0A0G2JKS1 128 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 A0A1W2PNU3 283 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 A0A1W2PQ27 194 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 A0A1W2PQ64 194 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 A0A1W2PQC6 194 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 ELOA3DA6NLF2 546 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 TTC36A6NLP5 189 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 HHLA1C9JL84 531 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 K7ESM1 405 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 CDK2AP1O14519 115 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 WNT9AO14904 365 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 MDM4O15151 490 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 NOBOXO60393 691 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 DTNBO60941 627 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 SIN3BO75182 1162 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 BEST1O76090 585 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 CST3P01034 146 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 IL1BP01584 269 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 HMBSP08397 361 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 DLATP10515 647 aaKnown RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 MZF1P28698 734 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 SCNN1AP37088 669 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 NNMTP40261 264 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 OXCT1P55809 520 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 SLC8A3P57103 927 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 PPP2CBP62714 309 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 PPP2CAP67775 309 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 PSMD6Q15008 389 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 NR0B2Q15466 257 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 TRIP4Q15650 581 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 SNRNP35Q16560 246 aaKnown RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 ZNF699Q32M78 642 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 KRTAP21-3Q3LHN1 58 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 ELOA3BQ3SY89 546 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 C9orf64Q5T6V5 341 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 RNF219Q5W0B1 726 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-207ENST00000520168 SCARA3Q6AZY7 606 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 NEK5Q6P3R8 708 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 ACOT1Q86TX2 421 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 ZSCAN30Q86W11 494 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 TICAM1Q8IUC6 712 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 HSCBQ8IWL3 235 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 DEPDC4Q8N2C3 294 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 FBXO39Q8N4B4 442 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 AADATQ8N5Z0 425 aa5.05□□□□□ -1.6
SDCBP-207ENST00000520168 TMEM145Q8NBT3 493 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms