RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 RPE65Q16518 533 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 HMBOX1Q6NT76 420 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 TRIM74Q86UV6 250 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 TRIM73Q86UV7 250 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 MMP21Q8N119 569 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 CMASQ8NFW8 434 aaPredicted RBP6.61□□□□□ -1.35
PTPN12-213ENST00000519553 IFT27Q9BW83 186 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 MROH8Q9H579 483 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 RNF146Q9NTX7 359 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 HSF4Q9ULV5 492 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 GTF2A1LQ9UNN4 478 aa6.61□□□□□ -1.35
PTPN12-213ENST00000519553 TMEM272A0A1B0GTI8 110 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 SH2D7A6NKC9 451 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 EYA2O00167 538 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 HOXC11O43248 304 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 NDUFB8O95169 186 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 CD72P21854 359 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 NR4A2P43354 598 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 ME1P48163 572 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 GAD2Q05329 585 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 TBL3Q12788 808 aaKnown RBP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 SYTL3Q4VX76 610 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 NUGGCQ68CJ6 796 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 RETSATQ6NUM9 610 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 IGFN1Q86VF2 1251 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 WDR5BQ86VZ2 330 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 KDM1BQ8NB78 822 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 SMG7Q92540 1137 aaKnown RBP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 NPLQ9BXD5 320 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 GPR63Q9BZJ6 419 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 TAOK3Q9H2K8 898 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 FOXP1Q9H334 677 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 TTC12Q9H892 705 aaPredicted RBP6.6□□□□□ -1.35
PTPN12-213ENST00000519553 PGAP2Q9UHJ9 254 aa6.6□□□□□ -1.35
PTPN12-213ENST00000519553 ZNF521Q96K83 1311 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 TARSL2A2RTX5 802 aaKnown RBP6.59□□□□□ -1.35
PTPN12-213ENST00000519553 OR6C68A6NDL8 312 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 MDM4O15151 490 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 STRNO43815 780 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 HBP1O60381 514 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 VAMP2P63027 116 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 ODF3L2Q3SX64 289 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 FBXO43Q4G163 708 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 LVRNQ6Q4G3 990 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.59□□□□□ -1.35
PTPN12-213ENST00000519553 CENPIQ92674 756 aaPredicted RBP6.59□□□□□ -1.35
PTPN12-213ENST00000519553 TEFMQ96QE5 360 aaKnown RBP6.59□□□□□ -1.35
PTPN12-213ENST00000519553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.59□□□□□ -1.35
PTPN12-213ENST00000519553 CXorf56Q9H5V9 222 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 C9orf78Q9NZ63 289 aaPredicted RBP6.59□□□□□ -1.35
PTPN12-213ENST00000519553 GRHL1Q9NZI5 618 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 NLKQ9UBE8 527 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 SUFUQ9UMX1 484 aa6.59□□□□□ -1.35
PTPN12-213ENST00000519553 NPHP1O15259 732 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 TMCC1O94876 653 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 IFNA2P01563 188 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 TMEM191BP0C7N4 346 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 UNGP13051 313 aaPredicted RBP6.58□□□□□ -1.36
PTPN12-213ENST00000519553 TNFSF8P32971 234 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 PTGER1P34995 402 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 ALDH7A1P49419 539 aaKnown RBP6.58□□□□□ -1.36
PTPN12-213ENST00000519553 TRPC3Q13507 836 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 UBAP2Q5T6F2 1119 aaKnown RBP6.58□□□□□ -1.36
PTPN12-213ENST00000519553 LRRC57Q8N9N7 239 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 TMEM174Q8WUU8 243 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 RAB40AQ8WXH6 277 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 HTRA1Q92743 480 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 SH3KBP1Q96B97 665 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 CHMP4AQ9BY43 222 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 WASH6PQ9NQA3 447 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 DECR2Q9NUI1 292 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 DHDHQ9UQ10 334 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 CLDN16Q9Y5I7 305 aa6.58□□□□□ -1.36
PTPN12-213ENST00000519553 CBX6O95503 412 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 ADAP00813 363 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 HNRNPA1P09651 372 aaKnown RBP eCLIP6.57□□□□□ -1.36
PTPN12-213ENST00000519553 PSMC2P35998 433 aaKnown RBP6.57□□□□□ -1.36
PTPN12-213ENST00000519553 SKIV2L2P42285 1042 aaKnown RBP6.57□□□□□ -1.36
PTPN12-213ENST00000519553 SLC18A3Q16572 532 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 HSP90AB4PQ58FF6 505 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 TMEM268Q5VZI3 342 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 IRF2BP2Q7Z5L9 587 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 FAM185AQ8N0U4 392 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 DPP10Q8N608 796 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 IL17REQ8NFR9 667 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 RFWD2Q8NHY2 731 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 ELP4Q96EB1 424 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 VCPIP1Q96JH7 1222 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 TBATAQ96M53 351 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 EPHX3Q9H6B9 360 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 ATP8A2Q9NTI2 1148 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 PLEKHB1Q9UF11 243 aaPredicted RBP6.57□□□□□ -1.36
PTPN12-213ENST00000519553 FBXO40Q9UH90 709 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 CRYL1Q9Y2S2 319 aa6.57□□□□□ -1.36
PTPN12-213ENST00000519553 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
PTPN12-213ENST00000519553 A0A1B0GVC2 190 aa6.56□□□□□ -1.36
PTPN12-213ENST00000519553 PER2O15055 1255 aa6.56□□□□□ -1.36
PTPN12-213ENST00000519553 TULP3O75386 442 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms