RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GRSF1Q12849 480 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLN8-202ENST00000517514 IHHQ14623 411 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 EIF4HQ15056 248 aaKnown RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 PRKD1Q15139 912 aaPredicted RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 CYTH1Q15438 398 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 ODF2Q5BJF6 829 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 DGKKQ5KSL6 1271 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 SEL1L2Q5TEA6 688 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 IL31Q6EBC2 164 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 PGBD5Q8N414 524 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 SH2D3CQ8N5H7 860 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 PRELID2Q8N945 189 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 IL17RCQ8NAC3 791 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 PJA1Q8NG27 643 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 ACTRT1Q8TDG2 376 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 FRS2Q8WU20 508 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 ACDQ96AP0 544 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 CLDN23Q96B33 292 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 HDAC11Q96DB2 347 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 CIPCQ9C0C6 399 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 LMAN1LQ9HAT1 526 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 C11orf16Q9NQ32 467 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 HS3ST2Q9Y278 367 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 RAD54BQ9Y620 910 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 ESPNB1AK53 854 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 SGK1O00141 431 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 TIMM44O43615 452 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 ATP9BO43861 1147 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 GJB3O75712 270 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 ASLP04424 464 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 HLA-EP13747 358 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 TCP1P17987 556 aaKnown RBP10.08□□□□□ -0.8
CLN8-202ENST00000517514 COL9A1P20849 921 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 CCNCP24863 283 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 WASP42768 502 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 RGRP47804 291 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 NR2C2P49116 596 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 SERPINH1P50454 418 aaKnown RBP10.08□□□□□ -0.8
CLN8-202ENST00000517514 IL10RBQ08334 325 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 SLC10A7Q0GE19 358 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 WASHC5Q12768 1159 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 UBXN2BQ14CS0 331 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 OASLQ15646 514 aaKnown RBP10.08□□□□□ -0.8
CLN8-202ENST00000517514 KCTD19Q17RG1 926 aaPredicted RBP10.08□□□□□ -0.8
CLN8-202ENST00000517514 C2orf27AQ580R0 203 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 ZC3H18Q86VM9 953 aaKnown RBP10.08□□□□□ -0.8
CLN8-202ENST00000517514 CCDC117Q8IWD4 279 aaPredicted RBP10.08□□□□□ -0.8
CLN8-202ENST00000517514 TEX26Q8N6G2 289 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 ALLCQ8N6M5 410 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 CNTD1Q8N815 330 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 ZNF366Q8N895 744 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 C1orf54Q8WWF1 131 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 P3H4Q92791 437 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 FATE1Q969F0 183 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 SHDQ96IW2 340 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 QKIQ96PU8 341 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLN8-202ENST00000517514 C2orf49Q9BVC5 232 aaPredicted RBP10.08□□□□□ -0.8
CLN8-202ENST00000517514 OSBPL6Q9BZF3 934 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 USP29Q9HBJ7 922 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 CACNA2D2Q9NY47 1150 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 DONSONQ9NYP3 566 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 LHX3Q9UBR4 397 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 DNPEPQ9ULA0 475 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 FCF1Q9Y324 198 aaKnown RBP10.08□□□□□ -0.8
CLN8-202ENST00000517514 SAR1BQ9Y6B6 198 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 WDFY4Q6ZS81 3184 aa10.08□□□□□ -0.8
CLN8-202ENST00000517514 CXorf51AA0A1B0GTR3 108 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 A0A1W2PQF6 199 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 CHURC1-FNTBB4DL54 471 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 KCNK1O00180 336 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 MATN3O15232 486 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 LIASO43766 372 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 TMCC1O94876 653 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 KLF8O95600 359 aaPredicted RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 DCNP07585 359 aaKnown RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 SRPRAP08240 638 aaKnown RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 RBP3P10745 1247 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 ALADP13716 330 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 RBL1P28749 1068 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 ETFBP38117 255 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 CETN2P41208 172 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 CLCN6P51797 869 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 EIF3EP60228 445 aaKnown RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 MRPS21P82921 87 aaKnown RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 SULT2A1Q06520 285 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 ZBTB17Q13105 803 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 XRCC4Q13426 336 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 PDK1Q15118 436 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 DLG2Q15700 870 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 CYP1B1Q16678 543 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 LONRF2Q1L5Z9 754 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 FBXO43Q4G163 708 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 PREPLQ4J6C6 727 aaPredicted RBP10.07□□□□□ -0.8
CLN8-202ENST00000517514 SLC45A4Q5BKX6 768 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 KIAA1211LQ6NV74 962 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 TTC27Q6P3X3 843 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 LRRC49Q8IUZ0 686 aa10.07□□□□□ -0.8
CLN8-202ENST00000517514 ATPAF2Q8N5M1 289 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms