RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 GNB4Q9HAV0 340 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PLCXD1Q9NUJ7 323 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 INTS10Q9NVR2 710 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ZNF224Q9NZL3 707 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IL17CQ9P0M4 197 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 LPAR3Q9UBY5 353 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 TSPAN16Q9UKR8 245 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 FZD4Q9ULV1 537 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 PHTF1Q9UMS5 762 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 SLC45A2Q9UMX9 530 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 EXO1Q9UQ84 846 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 WIF1Q9Y5W5 379 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 FLNCQ14315 2725 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 KIF26AQ9ULI4 1882 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 NEBP20929 6669 aa-0.65□□□□□ -2.51
RNU6-1238P-201ENST00000517215 ICE1Q9Y2F5 2266 aa-0.66□□□□□ -2.51
RNU6-1238P-201ENST00000517215 IGLV4-60A0A075B6I1 120 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 A0A087WWL8 130 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM168BA1KXE4 195 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PRSS38A1L453 326 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TMEM8BA6NDV4 472 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FBLL1A6NHQ2 334 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SAC3D1A6NKF1 404 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 C16orf96A6NNT2 1141 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FOXO6A8MYZ6 492 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KPNA7A9QM74 516 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PSMD9O00233 223 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DVL1O14640 695 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SNAI2O43623 268 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LDB2O43679 373 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GAGE7O76087 117 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KBTBD11O94819 623 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SEC31AO94979 1220 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TGDSO95455 350 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HPP00738 406 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 AMY1AP04745 511 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HOXD4P09016 255 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SBK3P0C264 359 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FAM157CP0CG43 387 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GAGE12FP0CL80 117 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GAGE12GP0CL81 117 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GAGE12IP0CL82 117 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DDCP20711 480 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CIITAP33076 1130 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RGRP47804 291 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MECP2P51608 486 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF75DP51815 510 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 JAK3P52333 1124 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DVL1P1P54792 670 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 WNT4P56705 351 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GSCP56915 257 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 BRWD1-AS2P59051 145 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CTXN1P60606 82 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PFN3P60673 137 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IGLV3-21P80748 117 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 CSTF1Q05048 431 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MYO1EQ12965 1108 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GAGE1Q13065 139 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GAGE4Q13068 117 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PSMD2Q13200 908 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TNFAIP1Q13829 316 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 E2F2Q14209 437 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF174Q15697 407 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ANXA2RQ3ZCQ2 193 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZC3H12BQ5HYM0 836 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RNLSQ5VYX0 342 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LIPMQ5VYY2 423 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RGS7BPQ6MZT1 257 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PWWP2BQ6NUJ5 590 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZSCAN2Q7Z7L9 614 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DPP9Q86TI2 863 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TRPT1Q86TN4 253 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PDSS2Q86YH6 399 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RAB11FIP4Q86YS3 637 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 IZUMO1Q8IYV9 350 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 POC5Q8NA72 575 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZFPM2Q8WW38 1151 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 GTF3AQ92664 365 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MTBPQ96DY7 904 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SGSM3Q96HU1 749 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SYT15Q9BQS2 421 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LRRC1Q9BTT6 524 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 TTLL2Q9BWV7 592 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 LAT2Q9GZY6 243 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ING2Q9H160 280 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 KLHL31Q9H511 634 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 DHX33Q9H6R0 707 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ERVK-5Q9HDB9 667 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MMP25Q9NPA2 562 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 ZNF71Q9NQZ8 489 aaPredicted RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 RNF146Q9NTX7 359 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 FBXO40Q9UH90 709 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PLEKHA6Q9Y2H5 1048 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 PCDHA9Q9Y5H5 950 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SRPRBQ9Y5M8 271 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 BRWD3Q6RI45 1802 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 HERC1Q15751 4861 aa-0.66□□□□□ -2.52
RNU6-1238P-201ENST00000517215 SRRM2Q9UQ35 2752 aaKnown RBP-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 A0A087WWV3 80 aa-0.67□□□□□ -2.52
RNU6-1238P-201ENST00000517215 MUC21A0A0G2JKD1 596 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms