RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 HS3ST2Q9Y278 367 aa13.37□□□□□ -0.27
CDK7-212ENST00000515180 PLXNA2O75051 1894 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 ANKRD62A6NC57 917 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 KCNK3O14649 394 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 MCF2LO15068 1137 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 RTN2O75298 545 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 CD160O95971 181 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 ADH1BP00325 375 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 CTSLP07711 333 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 RHOQP17081 205 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 PTMSP20962 102 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 ADPRHP54922 357 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 NRG1Q02297 640 aaPredicted RBP13.36□□□□□ -0.27
CDK7-212ENST00000515180 CNTN1Q12860 1018 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 SEMA3BQ13214 749 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 KCNT1Q5JUK3 1230 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 PLEKHA7Q6IQ23 1121 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 C22orf39Q6P5X5 142 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 OR2A12Q8NGT7 310 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 OR2T34Q8NGX1 318 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 ARHGEF2Q92974 986 aaKnown RBP13.36□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D31Q96DN5 1066 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 CNPY3Q9BT09 278 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 EDEM3Q9BZQ6 932 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 MYO1AQ9UBC5 1043 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 ADAMTS1Q9UHI8 967 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 FZD4Q9ULV1 537 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
CDK7-212ENST00000515180 FCF1Q9Y324 198 aaKnown RBP13.36□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3DA0A087WVF3 549 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3IA0A087WXS9 549 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3EA0A087X179 549 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3KA0A087X1G2 549 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3FA6NER0 549 aaPredicted RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3LB9A6J9 549 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 WNT9AO14904 365 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 CREB3O43889 395 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 ZNF821O75541 412 aaPredicted RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 GJB3O75712 270 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3HP0C7X1 549 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 CD59P13987 128 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 CSRP1P21291 193 aaKnown RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 PSMA2P25787 234 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 CD27P26842 260 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 CHRNA3P32297 505 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 DNA2P51530 1060 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 PPP2CBP62714 309 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 PPP2CAP67775 309 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 SCAPQ12770 1279 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 SFSWAPQ12872 951 aaKnown RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 KIF19Q2TAC6 998 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 FIGNQ5HY92 759 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 HGSNATQ68CP4 663 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3GQ6DHY5 549 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3CQ6IPX1 549 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 ZNF783Q6ZMS7 281 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TMC6Q7Z403 805 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 DSG4Q86SJ6 1040 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 TBC1D3Q8IZP1 549 aaPredicted RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 ARFGAP1Q8N6T3 406 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 NETO2Q8NC67 525 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 GRIN3AQ8TCU5 1115 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 ARRDC3Q96B67 414 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 ZNF653Q96CK0 615 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 VCPIP1Q96JH7 1222 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 SLC6A18Q96N87 628 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 CAMK1GQ96NX5 476 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 ACE2Q9BYF1 805 aaPredicted RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 GAREM1Q9H706 876 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 PARVAQ9NVD7 372 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 DNAAF2Q9NVR5 837 aaKnown RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 TMEM248Q9NWD8 314 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 CNOT8Q9UFF9 292 aaKnown RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 SNX11Q9Y5W9 270 aa13.35□□□□□ -0.27
CDK7-212ENST00000515180 CNOT1A5YKK6 2376 aaKnown RBP13.35□□□□□ -0.27
CDK7-212ENST00000515180 TMEM131Q92545 1883 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 SPAARA0A1B0GVQ0 90 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 A0A1W2PPC4 97 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 LRRC72A6NJI9 287 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 C1QTNF3-AMACRE9PGA6 284 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 KPNA3O00505 521 aaPredicted RBP13.34□□□□□ -0.27
CDK7-212ENST00000515180 ALOX15BO15296 676 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 GZMAP12544 262 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 EPHB2P29323 1055 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 MAT2AP31153 395 aaKnown RBP13.34□□□□□ -0.27
CDK7-212ENST00000515180 L1CAMP32004 1257 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 MAPKAPK2P49137 400 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 SERPINH1P50454 418 aaKnown RBP13.34□□□□□ -0.27
CDK7-212ENST00000515180 AFF3P51826 1226 aaKnown RBP13.34□□□□□ -0.27
CDK7-212ENST00000515180 FAM193AP78312 1265 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 CA9Q16790 459 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 SKOR2Q2VWA4 1001 aaPredicted RBP13.34□□□□□ -0.27
CDK7-212ENST00000515180 HLA-BQ31612 363 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 ARSIQ5FYB1 569 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 EFHC2Q5JST6 749 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
CDK7-212ENST00000515180 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms