RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 KIAA1211LQ6NV74 962 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 RWDD4Q6NW29 188 aaKnown RBP8.38□□□□□ -1.07
NEDD4-210ENST00000513957 PRR23BQ6ZRT6 265 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 USP30Q70CQ3 517 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 POLNQ7Z5Q5 900 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 RABEPKQ7Z6M1 372 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 TFAP2DQ7Z6R9 452 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 VSIG1Q86XK7 387 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 TMPRSS6Q8IU80 811 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 APCDD1Q8J025 514 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 UMODL1-AS1Q8N2C9 162 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 PGBD3Q8N328 593 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 SH2D3CQ8N5H7 860 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 LZTR1Q8N653 840 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 SORCS1Q8WY21 1168 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 FOXJ1Q92949 421 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 ISG20Q96AZ6 181 aaKnown RBP8.38□□□□□ -1.07
NEDD4-210ENST00000513957 CHP1Q99653 195 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 SNRNP25Q9BV90 132 aaKnown RBP8.38□□□□□ -1.07
NEDD4-210ENST00000513957 ACE2Q9BYF1 805 aaPredicted RBP8.38□□□□□ -1.07
NEDD4-210ENST00000513957 TGIF2Q9GZN2 237 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 RSPH9Q9H1X1 276 aaPredicted RBP8.38□□□□□ -1.07
NEDD4-210ENST00000513957 ZDHHC4Q9NPG8 344 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 TMPRSS4Q9NRS4 437 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 CTTNBP2NLQ9P2B4 639 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 NCDNQ9UBB6 729 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 ANKRD36A6QL64 1941 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 ABCA7Q8IZY2 2146 aa8.38□□□□□ -1.07
NEDD4-210ENST00000513957 A0A0A6YYK5 440 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 IGHV1OR15-9A0A0B4J2B8 117 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 ANTXRLA6NF34 631 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF487B1APH4 448 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 WASH3PC4AMC7 463 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 H3BRJ5 948 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 EEF2KO00418 725 aaKnown RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 SLC7A4O43246 635 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 CREB3O43889 395 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 PROSCO94903 275 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 EPN2O95208 641 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 DNTTP04053 509 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 CD6P30203 668 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 SERPINB6P35237 376 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 ARL4AP40617 200 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 PI4KAP42356 2102 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 WASP42768 502 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 SLC1A1P43005 524 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 PXNP49023 591 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 SERPINH1P50454 418 aaKnown RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 GSDMDP57764 484 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 SLC25A11Q02978 314 aaKnown RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 CCDC15Q0P6D6 951 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 POLD3Q15054 466 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 PLK5Q496M5 336 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 RAB6CQ53S08 254 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 FAM46CQ5VWP2 391 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 KIAA1324Q6UXG2 1013 aaKnown RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 RFX8Q6ZV50 586 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 CYP4V2Q6ZWL3 525 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 LPCAT2Q7L5N7 544 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 ASCL5Q7RTU5 278 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 FAM160A2Q8N612 972 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 ARFGAP1Q8N6T3 406 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 PCDH20Q8N6Y1 951 aaKnown RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 CADM4Q8NFZ8 388 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 OR52K2Q8NGK3 314 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 FAM71BQ8TC56 605 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 FRS2Q8WU20 508 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 OR8D1Q8WZ84 308 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 LRIG1Q96JA1 1093 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 PEBP4Q96S96 227 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 PSMB7Q99436 277 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 TPSD1Q9BZJ3 242 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 TRIM7Q9C029 511 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 MKRN2Q9H000 416 aaKnown RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 RAB6CQ9H0N0 254 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 DUSP15Q9H1R2 295 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 DHX35Q9H5Z1 703 aaKnown RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 ATP13A1Q9HD20 1204 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 PRSS16Q9NQE7 514 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 ITM2CQ9NQX7 267 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 VPS51Q9UID3 782 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 FZD4Q9ULV1 537 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 RAD54BQ9Y620 910 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 TP53BP1Q12888 1972 aaPredicted RBP8.37□□□□□ -1.07
NEDD4-210ENST00000513957 SHROOM3Q8TF72 1996 aa8.37□□□□□ -1.07
NEDD4-210ENST00000513957 A0A0D9SEW6 157 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 ARHGAP42A6NI28 874 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 C1QTNF3-AMACRE9PGA6 284 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 FAM72CH0Y354 149 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 CBX4O00257 560 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 MCF2LO15068 1137 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 DAPK3O43293 454 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 SIN3BO75182 1162 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 NDUFA10O95299 355 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 SRCP12931 536 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 HLA-EP13747 358 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 C5AR1P21730 350 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 RECQLP46063 649 aaPredicted RBP8.36□□□□□ -1.07
NEDD4-210ENST00000513957 TPMTP51580 245 aa8.36□□□□□ -1.07
NEDD4-210ENST00000513957 PDK2Q15119 407 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms