RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 SETD3Q86TU7 594 aaPredicted RBP9.32□□□□□ -0.92
NR1I3-228ENST00000511676 ZC3H18Q86VM9 953 aaKnown RBP9.32□□□□□ -0.92
NR1I3-228ENST00000511676 KLHDC8BQ8IXV7 354 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 YAF2Q8IY57 180 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 SYNPOQ8N3V7 929 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 CPXM2Q8N436 756 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 NAT8LQ8N9F0 302 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 FAM71DQ8N9W8 422 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 MCUQ8NE86 351 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 FGF13Q92913 245 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 LRRC39Q96DD0 335 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 ZFRQ96KR1 1074 aaKnown RBP9.32□□□□□ -0.92
NR1I3-228ENST00000511676 TTC25Q96NG3 672 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 MYADMQ96S97 322 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 TRMT61BQ9BVS5 477 aaKnown RBP9.32□□□□□ -0.92
NR1I3-228ENST00000511676 TRIM31Q9BZY9 425 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 SIK2Q9H0K1 926 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 C8orf33Q9H7E9 229 aaPredicted RBP9.32□□□□□ -0.92
NR1I3-228ENST00000511676 PPCSQ9HAB8 311 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 ZNF334Q9HCZ1 680 aaPredicted RBP9.32□□□□□ -0.92
NR1I3-228ENST00000511676 MED4Q9NPJ6 270 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 TMPRSS4Q9NRS4 437 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 ZNF212Q9UDV6 495 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 ARHGAP26Q9UNA1 814 aa9.32□□□□□ -0.92
NR1I3-228ENST00000511676 E2F8A0AVK6 867 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 TYW5A2RUC4 315 aaKnown RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 KRBA1A5PL33 1030 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 GOLGA6CA6NDK9 693 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 GOLGA6BA6NDN3 693 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 ARHGAP42A6NI28 874 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 E7ESA3 106 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 PSMD3O43242 534 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 MOCS2O96007 188 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 ABHD2P08910 425 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 NUDT17P0C025 328 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 GOLGA6DP0CG33 693 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 MLNP12872 115 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 HDCP19113 662 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 CORO1AP31146 461 aaKnown RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 CHKAP35790 457 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 TNNT3P45378 269 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 GDF10P55107 478 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 SARNPP82979 210 aaKnown RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 DSG2Q14126 1118 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 KCNJ11Q14654 390 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 PARP6Q2NL67 630 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 FAM133BQ5BKY9 247 aaKnown RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 RWDD4Q6NW29 188 aaKnown RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 ARHGEF18Q6ZSZ5 1173 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 CHSY1Q86X52 802 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 ARHGAP12Q8IWW6 846 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 CCDC13Q8IYE1 715 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 KIAA2013Q8IYS2 634 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 IQCKQ8N0W5 287 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 ATPAF2Q8N5M1 289 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 NPWQ8N729 165 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 GOLGA6L1Q8N7Z2 621 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 CSGALNACT1Q8TDX6 532 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 CPT1BQ92523 772 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 MAML1Q92585 1016 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 CLDN23Q96B33 292 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 ZNF707Q96C28 371 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 OTUB2Q96DC9 234 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 P2RY11Q96G91 374 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 ZNF599Q96NL3 588 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 RPRD1AQ96P16 312 aaPredicted RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 FAM118BQ9BPY3 351 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 MAGEH1Q9H213 219 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 PABPC3Q9H361 631 aaKnown RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 BRD9Q9H8M2 597 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 KIF9Q9HAQ2 790 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 XAB2Q9HCS7 855 aaKnown RBP9.31□□□□□ -0.92
NR1I3-228ENST00000511676 GOLGA6AQ9NYA3 693 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 NUDT5Q9UKK9 219 aa9.31□□□□□ -0.92
NR1I3-228ENST00000511676 ILVBLA1L0T0 632 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 C2orf78A6NCI8 922 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 RNF103O00237 685 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 MATN3O15232 486 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 CACNG3O60359 315 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 GREM1O60565 184 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 MAFKO60675 156 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 ATG13O75143 517 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 SPAG6O75602 509 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 DCNP07585 359 aaKnown RBP9.3□□□□□ -0.92
NR1I3-228ENST00000511676 FAM153BP0C7A2 387 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 C7P10643 843 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 MBL2P11226 248 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-228ENST00000511676 PSMC3P17980 439 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 PMS2P54278 862 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 ARL4CP56559 192 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 MRPS25P82663 173 aaKnown RBP9.3□□□□□ -0.92
NR1I3-228ENST00000511676 CSTF1Q05048 431 aaKnown RBP9.3□□□□□ -0.92
NR1I3-228ENST00000511676 DHX9Q08211 1270 aaKnown RBP9.3□□□□□ -0.92
NR1I3-228ENST00000511676 HNRNPDQ14103 355 aaKnown RBP9.3□□□□□ -0.92
NR1I3-228ENST00000511676 RFTN1Q14699 578 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-228ENST00000511676 TRADDQ15628 312 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 SLC14A2Q15849 920 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 HIF1AQ16665 826 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 FAM153CQ494X1 144 aa9.3□□□□□ -0.92
NR1I3-228ENST00000511676 DGKKQ5KSL6 1271 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms