RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 NBL1P41271 181 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 DPP6P42658 865 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 CTSOP43234 321 aaPredicted RBP9.33□□□□□ -0.92
NUP54-207ENST00000508583 FNTBP49356 437 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 TAS2R40P59535 323 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 COPS2P61201 443 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 SNRPD1P62314 119 aaKnown RBP9.33□□□□□ -0.92
NUP54-207ENST00000508583 RAD51Q06609 339 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 SERINC3Q13530 473 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 TFDP2Q14188 446 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 DPYSL3Q14195 570 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 ELF2Q15723 593 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 INO80DQ53TQ3 878 aaPredicted RBP9.33□□□□□ -0.92
NUP54-207ENST00000508583 ANKRD20A8PQ5CZ79 823 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 KIAA1324Q6UXG2 1013 aaKnown RBP9.33□□□□□ -0.92
NUP54-207ENST00000508583 SLC36A4Q6YBV0 504 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 CEP68Q76N32 757 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 PEX26Q7Z412 305 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 KBTBD6Q86V97 674 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 TMPRSS6Q8IU80 811 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 PLPP6Q8IY26 295 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 RCOR2Q8IZ40 523 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 ATPAF2Q8N5M1 289 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 OR52K2Q8NGK3 314 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 GAB3Q8WWW8 586 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 TSC1Q92574 1164 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 HMCESQ96FZ2 354 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 MYO19Q96H55 970 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 RPL10LQ96L21 214 aaKnown RBP9.33□□□□□ -0.92
NUP54-207ENST00000508583 MRGPRX3Q96LB0 322 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 MRGPRX1Q96LB2 322 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 ZNF599Q96NL3 588 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 PSMB7Q99436 277 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 DESI2Q9BSY9 194 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 LRRC19Q9H756 370 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 SP110Q9HB58 689 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 ZDHHC4Q9NPG8 344 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 POLR3BQ9NW08 1133 aaPredicted RBP9.33□□□□□ -0.92
NUP54-207ENST00000508583 UBA2Q9UBT2 640 aaPredicted RBP9.33□□□□□ -0.92
NUP54-207ENST00000508583 AMFRQ9UKV5 643 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 NCKAP1Q9Y2A7 1128 aa9.33□□□□□ -0.92
NUP54-207ENST00000508583 FANCMQ8IYD8 2048 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 TTC34A8MYJ7 566 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 WASH3PC4AMC7 463 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 DFFAO00273 331 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 MCF2LO15068 1137 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 ZSCAN12O43309 604 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 SNAP91O60641 907 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 LILRB5O75023 590 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 ZNF189O75820 626 aaPredicted RBP9.32□□□□□ -0.92
NUP54-207ENST00000508583 RHOBTB1O94844 696 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 GSRP00390 522 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 PRNPP04156 253 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 SRCP12931 536 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 TNNT1P13805 278 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 NDUFV2P19404 249 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 C5AR1P21730 350 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 KDELR1P24390 212 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 MSNP26038 577 aaKnown RBP9.32□□□□□ -0.92
NUP54-207ENST00000508583 CTNNA1P35221 906 aaKnown RBP9.32□□□□□ -0.92
NUP54-207ENST00000508583 HSPA9P38646 679 aaKnown RBP9.32□□□□□ -0.92
NUP54-207ENST00000508583 MAPK8P45983 427 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 STK19P49842 368 aaPredicted RBP9.32□□□□□ -0.92
NUP54-207ENST00000508583 RENBPP51606 427 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 ARSEP51690 589 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 CCDC173Q0VFZ6 552 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 GRM3Q14832 879 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 DLG2Q15700 870 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 TFDP3Q5H9I0 405 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 SPDYCQ5MJ68 293 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 ARTNQ5T4W7 220 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 C9orf64Q5T6V5 341 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 AFMIDQ63HM1 303 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 TXNRD3NBQ6F5E7 133 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 TIGD7Q6NT04 549 aaPredicted RBP9.32□□□□□ -0.92
NUP54-207ENST00000508583 KIAA1211LQ6NV74 962 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 C22orf39Q6P5X5 142 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 CCDC50Q8IVM0 306 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 KATNAL2Q8IYT4 538 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 EXD1Q8NHP7 514 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 FRS2Q8WU20 508 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 FAF2Q96CS3 445 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 PPP1R16AQ96I34 528 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 LRIG1Q96JA1 1093 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 PDLIM2Q96JY6 352 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 FERMT1Q9BQL6 677 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 MAGEB5Q9BZ81 275 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 LACRTQ9GZZ8 138 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 RSPH9Q9H1X1 276 aaPredicted RBP9.32□□□□□ -0.92
NUP54-207ENST00000508583 EPC1Q9H2F5 836 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 SCUBE2Q9NQ36 999 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 PRSS16Q9NQE7 514 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 DYRK4Q9NR20 520 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 NDFIP2Q9NV92 336 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 FAM86C1Q9NVL1 165 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 SLCO3A1Q9UIG8 710 aa9.32□□□□□ -0.92
NUP54-207ENST00000508583 TPX2Q9ULW0 747 aaKnown RBP9.32□□□□□ -0.92
NUP54-207ENST00000508583 NUP205Q92621 2012 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 MYO15AQ9UKN7 3530 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 GRID2IPA4D2P6 1211 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms