RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 NPPBP16860 134 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 AKT1P31749 480 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 GRK5P34947 590 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 PUM3Q15397 648 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 WBP2NLQ6ICG8 309 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 C8orf82Q6P1X6 216 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 LDHAL6AQ6ZMR3 332 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 ANKRD18AQ8IVF6 992 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 IPO4Q8TEX9 1081 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 WBP2Q969T9 261 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 SPRY4Q9C004 299 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 FBXO9Q9UK97 447 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 PCDHGB3Q9Y5G1 929 aa4.64□□□□□ -1.67
TRAPPC13-209ENST00000508304 A0A087WV62 115 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3DA0A087WVF3 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3IA0A087WXS9 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3EA0A087X179 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3KA0A087X1G2 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3BA6NDS4 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3FA6NER0 549 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3LB9A6J9 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 I6L893 689 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 PCDH17O14917 1159 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 FFAR2O15552 330 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 SKAP2O75563 359 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3HP0C7X1 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 HSD3B1P14060 373 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 POLE2P56282 527 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 ZP1P60852 638 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 GRM4Q14833 912 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 MAPRE1Q15691 268 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 ZRSR1Q15695 479 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 ENTPD8Q5MY95 495 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 C10orf76Q5T2E6 689 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 DCAF12L2Q5VW00 463 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3GQ6DHY5 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3CQ6IPX1 549 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 H1FNTQ75WM6 255 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TBC1D3Q8IZP1 549 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 RTP4Q96DX8 246 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 WDR77Q9BQA1 342 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 TMEM120AQ9BXJ8 343 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 SWAP70Q9UH65 585 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 SLC12A4Q9UP95 1085 aa4.63□□□□□ -1.67
TRAPPC13-209ENST00000508304 PLSCR5A0PG75 271 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 KAT7O95251 611 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 ALDOCP09972 364 aaKnown RBP4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 ZNF12P17014 697 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 TAS2R50P59544 299 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 PMPCAQ10713 525 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 PPFIA1Q13136 1202 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 GALNT3Q14435 633 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 TAF12Q16514 161 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 KIF26BQ2KJY2 2108 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 JAKMIP3Q5VZ66 844 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 CLEC4GQ6UXB4 293 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 TMEM41AQ96HV5 264 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 MPP4Q96JB8 637 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 DOCK7Q96N67 2140 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 RETREG1Q9H6L5 497 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 LRFN1Q9P244 771 aa4.62□□□□□ -1.67
TRAPPC13-209ENST00000508304 MSI1O43347 362 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 LARGE1O95461 756 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 AGR2O95994 175 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 CSTBP04080 98 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 LCKP06239 509 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 SP1P08047 785 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 MAN1A1P33908 653 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 STAT1P42224 750 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 RPL15P61313 204 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 RBM6P78332 1123 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 SHC2P98077 582 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 RNASELQ05823 741 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 FOXD4Q12950 439 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 PRKG1Q13976 671 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 TUBB8Q3ZCM7 444 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 TDRD12Q587J7 1177 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 ATPAF1Q5TC12 328 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 MEX3BQ6ZN04 569 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 KDM1BQ8NB78 822 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 PPHLN1Q8NEY8 458 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 GCC1Q96CN9 775 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 ZSCAN31Q96LW9 406 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 ISCA1Q9BUE6 129 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 CATSPERBQ9H7T0 1116 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 PNRC2Q9NPJ4 139 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 MAP3K20Q9NYL2 800 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 RRN3Q9NYV6 651 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 ZNF69Q9UC07 566 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 RAB21Q9UL25 225 aa4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 TRPC5Q9UL62 973 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-209ENST00000508304 LOC105369274A0A096LPK9 316 aa4.6□□□□□ -1.67
TRAPPC13-209ENST00000508304 LOC102723532A0A0G2JNH3 316 aa4.6□□□□□ -1.67
TRAPPC13-209ENST00000508304 CXorf65A6NEN9 183 aa4.6□□□□□ -1.67
TRAPPC13-209ENST00000508304 EPB41L2O43491 1005 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-209ENST00000508304 DNPH1O43598 174 aa4.6□□□□□ -1.67
TRAPPC13-209ENST00000508304 RPP40O75818 363 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-209ENST00000508304 IGLV2-11P01706 119 aa4.6□□□□□ -1.67
TRAPPC13-209ENST00000508304 CYP3A4P08684 503 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms