RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CBWD6Q4V339 395 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 C3orf38Q5JPI3 329 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CBWD3Q5JTY5 395 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CBWD5Q5RIA9 395 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 PAPD7Q5XG87 772 aaKnown RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 ARHGEF18Q6ZSZ5 1173 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 MRPL10Q7Z7H8 261 aaKnown RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 SLC30A5Q8TAD4 765 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 PLEKHO2Q8TD55 490 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 THOC1Q96FV9 657 aaKnown RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 TOX2Q96NM4 488 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 FTHL17Q9BXU8 183 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 IFIH1Q9BYX4 1025 aaKnown RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 DEF6Q9H4E7 631 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 ERVK-5Q9HDB9 667 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 DNAJC12Q9UKB3 198 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 ITGA11Q9UKX5 1188 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 GRIN2DO15399 1336 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CTAGE15A4D2H0 777 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 B4E171 279 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 NPC1O15118 1278 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 ZNF623O75123 536 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 IQCF3P0C7M6 154 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 TMEM191BP0C7N4 346 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CTAGE8P0CG41 777 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 TRIM49P0CI25 452 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 TRIM49CP0CI26 452 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 P4HA1P13674 534 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 HOXA11P31270 313 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 GCLMP48507 274 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 ACOT2P49753 483 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 DLG4P78352 724 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 SMC1AQ14683 1233 aaKnown RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 ASTE1Q2TB18 679 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 ARL13BQ3SXY8 428 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CTAGE6Q86UF2 777 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 ZNF677Q86XU0 584 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 CTAGE4Q8IX94 777 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 SLC7A5P1Q8MH63 180 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 KRT222Q8N1A0 295 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 GOT1L1Q8NHS2 421 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 APBB2Q92870 758 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 USP13Q92995 863 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 LBHD1Q9BQE6 289 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 PAPOLBQ9NRJ5 636 aaKnown RBP7.36□□□□□ -1.23
CLCN3-206ENST00000507875 MARCH2Q9P0N8 246 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 SPATA7Q9P0W8 599 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 SAR1BQ9Y6B6 198 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 DUSP10Q9Y6W6 482 aa7.36□□□□□ -1.23
CLCN3-206ENST00000507875 MYH10P35580 1976 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ARPC4-TTLL3A0A0A6YYG9 625 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 B4GALT5O43286 388 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ATP8B1O43520 1251 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 HLA-DRAP01903 254 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 DNTTP04053 509 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ATP1A1P05023 1023 aaKnown RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CYP17A1P05093 508 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 KCNE1P15382 129 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 BMP8BP34820 402 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ETV3P41162 512 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 TNK2Q07912 1038 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 AP1B1Q10567 949 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 SMAD1Q15797 465 aaKnown RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 FBXO47Q5MNV8 452 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ITPRIPL1Q6GPH6 555 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ALKAL1Q6UXT8 129 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 FAM228AQ86W67 206 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 TOP6BLQ8N6T0 577 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 HDAC2Q92769 488 aaKnown RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 DLG3Q92796 817 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CCDC127Q96BQ5 260 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 SLC35A4Q96G79 324 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 RADILQ96JH8 1075 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CRACR2AQ9BSW2 395 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CCDC68Q9H2F9 335 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CYP3A43Q9HB55 503 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 PDE11AQ9HCR9 933 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 SLC38A7Q9NVC3 462 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ETAA1Q9NY74 926 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ZMYND8Q9ULU4 1186 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CNTN6Q9UQ52 1028 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 A0A088AWK7 358 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 A0A1W2PPC4 97 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 MACROD2A1Z1Q3 448 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 CCDC151A5D8V7 595 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 INPPL1O15357 1258 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 E2F6O75461 281 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ALX3O95076 343 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 APBB3O95704 486 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 PNMA6AP0CW24 399 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 DLATP10515 647 aaKnown RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 PBLDP30039 288 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 RFC2P35250 354 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 PNPLA4P41247 253 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 ZNF200P98182 395 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-206ENST00000507875 TRPC3Q13507 836 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 TMEM132DQ14C87 1099 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 PPA1Q15181 289 aa7.35□□□□□ -1.23
CLCN3-206ENST00000507875 SLC14A2Q15849 920 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms