RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 GBE1Q04446 702 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 MESP2Q0VG99 397 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 LONRF2Q1L5Z9 754 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 EGFLAMQ63HQ2 1017 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 ZNF687Q8N1G0 1237 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 SPEM1Q8N4L4 309 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 SH2D3CQ8N5H7 860 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 TFB1MQ8WVM0 346 aaKnown RBP20.48■□□□□ 0.87
USP53-203ENST00000507597 FATE1Q969F0 183 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 ISG20Q96AZ6 181 aaKnown RBP20.48■□□□□ 0.87
USP53-203ENST00000507597 OSBPL9Q96SU4 736 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 POLMQ9NP87 494 aaPredicted RBP20.48■□□□□ 0.87
USP53-203ENST00000507597 RBM12Q9NTZ6 932 aaKnown RBP20.48■□□□□ 0.87
USP53-203ENST00000507597 MTF2Q9Y483 593 aaPredicted RBP20.48■□□□□ 0.87
USP53-203ENST00000507597 STON1Q9Y6Q2 735 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 KIAA1549LQ6ZVL6 1849 aa20.48■□□□□ 0.87
USP53-203ENST00000507597 EDDM13A0A1B0GTR0 161 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 ATP9BO43861 1147 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 ZMPSTE24O75844 475 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 ALDH1A2O94788 518 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 HSPA9P38646 679 aaKnown RBP20.47■□□□□ 0.87
USP53-203ENST00000507597 PAFAH1B1P43034 410 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 RAD51Q06609 339 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 HNRNPDQ14103 355 aaKnown RBP20.47■□□□□ 0.87
USP53-203ENST00000507597 LLGL1Q15334 1064 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 EMC10Q5UCC4 262 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 MARC1Q5VT66 337 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 DCAF12L1Q5VU92 463 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 PAPD7Q5XG87 772 aaKnown RBP20.47■□□□□ 0.87
USP53-203ENST00000507597 MAMSTRQ6ZN01 415 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 CCDC13Q8IYE1 715 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 C17orf53Q8N3J3 647 aaPredicted RBP20.47■□□□□ 0.87
USP53-203ENST00000507597 PCDH20Q8N6Y1 951 aaKnown RBP20.47■□□□□ 0.87
USP53-203ENST00000507597 IL17RCQ8NAC3 791 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 TXNDC5Q8NBS9 432 aaKnown RBP20.47■□□□□ 0.87
USP53-203ENST00000507597 RPL10LQ96L21 214 aaKnown RBP20.47■□□□□ 0.87
USP53-203ENST00000507597 EPHX3Q9H6B9 360 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 AMACRQ9UHK6 382 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 TTC7AQ9ULT0 858 aaPredicted RBP20.47■□□□□ 0.87
USP53-203ENST00000507597 MMP17Q9ULZ9 603 aa20.47■□□□□ 0.87
USP53-203ENST00000507597 F5P12259 2224 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 COL4A3Q01955 1670 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 H7C0C1 242 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 MATN3O15232 486 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 RNASEH1O60930 286 aaKnown RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 FGGP02679 453 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 EPHX1P07099 455 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 DCNP07585 359 aaKnown RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 HOXB2P14652 356 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 CXCR5P32302 372 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 ATP5OP48047 213 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 CCR3P51677 355 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 SNRPD1P62314 119 aaKnown RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 ARF5P84085 180 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 PPIDQ08752 370 aaKnown RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 AP1B1Q10567 949 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 SFSWAPQ12872 951 aaKnown RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 FZD5Q13467 585 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 ENPP2Q13822 863 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 NOMO1Q15155 1222 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 DLG2Q15700 870 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 HNRNPA1L2Q32P51 320 aaKnown RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 CWF19L1Q69YN2 538 aaKnown RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 SYT13Q7L8C5 426 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 DSG4Q86SJ6 1040 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 CDKL3Q8IVW4 592 aaPredicted RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 PLPP6Q8IY26 295 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 ALLCQ8N6M5 410 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 SORCS1Q8WY21 1168 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 EZH1Q92800 747 aaPredicted RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 C16orf45Q96MC5 204 aaPredicted RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 WDR24Q96S15 920 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 GABRG3Q99928 467 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 CINPQ9BW66 212 aaPredicted RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 TMEM245Q9H330 911 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.46■□□□□ 0.87
USP53-203ENST00000507597 SEPT3Q9UH03 358 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 MFHAS1Q9Y4C4 1052 aa20.46■□□□□ 0.87
USP53-203ENST00000507597 NCOR1O75376 2440 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 GOLGA6L10A0A0M3HER8 536 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 PRR33A8MZF0 331 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 PGRMC1O00264 195 aaKnown RBP20.45■□□□□ 0.86
USP53-203ENST00000507597 MAFKO60675 156 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 GPR37L1O60883 481 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 STK10O94804 968 aaKnown RBP20.45■□□□□ 0.86
USP53-203ENST00000507597 SRCP12931 536 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 IL12RB1P42701 662 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 CTSOP43234 321 aaPredicted RBP20.45■□□□□ 0.86
USP53-203ENST00000507597 DGKEP52429 567 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 EIF3EP60228 445 aaKnown RBP20.45■□□□□ 0.86
USP53-203ENST00000507597 OTUD4Q01804 1114 aaKnown RBP20.45■□□□□ 0.86
USP53-203ENST00000507597 ZNF235Q14590 738 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 LBRQ14739 615 aaKnown RBP20.45■□□□□ 0.86
USP53-203ENST00000507597 PTPRNQ16849 979 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 HEATR6Q6AI08 1181 aaKnown RBP20.45■□□□□ 0.86
USP53-203ENST00000507597 SYT10Q6XYQ8 523 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 NYAP1Q6ZVC0 841 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 RASGEF1CQ8N431 466 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 ACTL9Q8TC94 416 aa20.45■□□□□ 0.86
USP53-203ENST00000507597 ACTRT1Q8TDG2 376 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms