RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 DGKGP49619 791 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 IFI35P80217 286 aaPredicted RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 ZP2Q05996 745 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 SULT2A1Q06520 285 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 AP1B1Q10567 949 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 WASHC5Q12768 1159 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 TDGQ13569 410 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 SNX1Q13596 522 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 HNRNPDQ14103 355 aaKnown RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 RFTN1Q14699 578 aaPredicted RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 NUMA1Q14980 2115 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 P3H1Q32P28 736 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 PREPLQ4J6C6 727 aaPredicted RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 TEX44Q53QW1 395 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 INO80DQ53TQ3 878 aaPredicted RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 PITRM1Q5JRX3 1037 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 HEATR6Q6AI08 1181 aaKnown RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 C4orf22Q6V702 233 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 ARHGAP36Q6ZRI8 547 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 RINLQ6ZS11 566 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 SYDE1Q6ZW31 735 aaPredicted RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 ADIPOR2Q86V24 386 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 C12orf40Q86WS4 652 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 SUGP1Q8IWZ8 645 aaKnown RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 KLHL7Q8IXQ5 586 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 CCDC105Q8IYK2 499 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 APCDD1Q8J025 514 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 AHI1Q8N157 1196 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 ATPAF2Q8N5M1 289 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 NOA1Q8NC60 698 aaKnown RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 NETO2Q8NC67 525 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 CCNYQ8ND76 341 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 CSGALNACT1Q8TDX6 532 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 ATXN2LQ8WWM7 1075 aaKnown RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 HTR3CQ8WXA8 447 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 CASKIN2Q8WXE0 1202 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 BHMTQ93088 406 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 ITFG2Q969R8 447 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 PAIP2Q9BPZ3 127 aaKnown RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 C2orf49Q9BVC5 232 aaPredicted RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 C8orf33Q9H7E9 229 aaPredicted RBP7.35□□□□□ -1.23
NUP54-204ENST00000506098 ABCB8Q9NUT2 735 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 TRHDEQ9UKU6 1024 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 HPCAL4Q9UM19 191 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 TRIOO75962 3097 aa7.35□□□□□ -1.23
NUP54-204ENST00000506098 CACNA1IQ9P0X4 2223 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.34□□□□□ -1.23
NUP54-204ENST00000506098 SGK1O00141 431 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 KCNN4O15554 427 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 TTI1O43156 1089 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 RAD51CO43502 376 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 TIMM44O43615 452 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 ECEL1O95672 775 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 GAS8O95995 478 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 ASLP04424 464 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 SRPRAP08240 638 aaKnown RBP7.34□□□□□ -1.23
NUP54-204ENST00000506098 SRFP11831 508 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 BMP1P13497 986 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 CCNB1P14635 433 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 GLDCP23378 1020 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 PTPN3P26045 913 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 SLC6A11P48066 632 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 RENBPP51606 427 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 CLCN6P51797 869 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 DRG2P55039 364 aaKnown RBP7.34□□□□□ -1.23
NUP54-204ENST00000506098 GDF10P55107 478 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 GEMIN4P57678 1058 aaKnown RBP7.34□□□□□ -1.23
NUP54-204ENST00000506098 ARF5P84085 180 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 DR1Q01658 176 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 PFKPQ01813 784 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 PTK6Q13882 451 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 GEN1Q17RS7 908 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 FUT11Q495W5 492 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 ANKRD20A2Q5SQ80 823 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 ANKRD20A1Q5TYW2 823 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 ANKRD20A3Q5VUR7 823 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 TMEM215Q68D42 235 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 IL31Q6EBC2 164 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 ALG1LQ6GMV1 187 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 GRAMD4Q6IC98 578 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 METTL3Q86U44 580 aaKnown RBP7.34□□□□□ -1.23
NUP54-204ENST00000506098 RALGPS2Q86X27 583 aaPredicted RBP7.34□□□□□ -1.23
NUP54-204ENST00000506098 JAMLQ86YT9 394 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 KLHDC8BQ8IXV7 354 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 CCDC33Q8N5R6 958 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 NAT16Q8N8M0 369 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 TERB1Q8NA31 727 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 KDM1BQ8NB78 822 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 LRRN4CLQ8ND94 238 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 CCHCR1Q8TD31 782 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 SEC14L1Q92503 715 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 MSANTD3Q96H12 275 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 TEKT5Q96M29 485 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 PNKPQ96T60 521 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 FERMT1Q9BQL6 677 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 LRRC1Q9BTT6 524 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 C10orf88Q9H8K7 445 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 SP110Q9HB58 689 aa7.34□□□□□ -1.23
NUP54-204ENST00000506098 PCDH9Q9HC56 1237 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms