RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 MSI1O43347 362 aaKnown RBP11.53□□□□□ -0.56
NFKB1-205ENST00000505458 SIN3BO75182 1162 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 PAPSS2O95340 614 aaPredicted RBP11.53□□□□□ -0.56
NFKB1-205ENST00000505458 HOXB8P17481 243 aaPredicted RBP11.53□□□□□ -0.56
NFKB1-205ENST00000505458 ALDH7A1P49419 539 aaKnown RBP11.53□□□□□ -0.56
NFKB1-205ENST00000505458 C5orf22Q49AR2 442 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 KIAA0930Q6ICG6 404 aaPredicted RBP11.53□□□□□ -0.56
NFKB1-205ENST00000505458 GALNT7Q86SF2 657 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 CRIPAKQ8N1N5 446 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 LRRN4Q8WUT4 740 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 PLD4Q96BZ4 506 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 KLHL29Q96CT2 875 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 TMEM237Q96Q45 408 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 CEP41Q9BYV8 373 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 RBM22Q9NW64 420 aaKnown RBP eCLIP11.53□□□□□ -0.562e-6■■■□□ 19
NFKB1-205ENST00000505458 MICAL3Q7RTP6 2002 aa11.53□□□□□ -0.56
NFKB1-205ENST00000505458 HEATR9A2RTY3 570 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 ANKRD65E5RJM6 399 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 MOCS2O96007 188 aaPredicted RBP11.52□□□□□ -0.56
NFKB1-205ENST00000505458 CREMQ03060 361 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 EFEMP1Q12805 493 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 BMPR2Q13873 1038 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 TAF1BQ53T94 588 aaPredicted RBP11.52□□□□□ -0.56
NFKB1-205ENST00000505458 MS4A13Q5J8X5 152 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 PIK3R6Q5UE93 754 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 CNKSR3Q6P9H4 555 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 CTU1Q7Z7A3 348 aaKnown RBP11.52□□□□□ -0.56
NFKB1-205ENST00000505458 ZNF683Q8IZ20 524 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 GPR62Q9BZJ7 368 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 RHOJQ9H4E5 214 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 SLCO1B3Q9NPD5 702 aa11.52□□□□□ -0.56
NFKB1-205ENST00000505458 AFF4Q9UHB7 1163 aaKnown RBP11.52□□□□□ -0.56
NFKB1-205ENST00000505458 TPP1O14773 563 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 ETFBP38117 255 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 SLC11A2P49281 568 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 PAPOLAP51003 745 aaKnown RBP11.52□□□□□ -0.57
NFKB1-205ENST00000505458 NCALDP61601 193 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.57
NFKB1-205ENST00000505458 RABGAP1LQ5R372 815 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 MARC1Q5VT66 337 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 STRA8Q7Z7C7 330 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 TEX26Q8N6G2 289 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 FITM2Q8N6M3 262 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 CNTD1Q8N815 330 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 ARMC2Q8NEN0 867 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 MAGEC3Q8TD91 643 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 PPP4R1Q8TF05 950 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 SPOCK2Q92563 424 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 NUP205Q92621 2012 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 SEPT5Q99719 369 aaPredicted RBP11.52□□□□□ -0.57
NFKB1-205ENST00000505458 HIPK3Q9H422 1215 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 C20orf96Q9NUD7 363 aaPredicted RBP11.52□□□□□ -0.57
NFKB1-205ENST00000505458 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 TCAF1Q9Y4C2 921 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 SNX10Q9Y5X0 201 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 F8W810 466 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 LATS1O95835 1130 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 SERPINE1P05121 402 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 CES1P23141 567 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 ADRA1AP35348 466 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 TAF10Q12962 218 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 STX3Q13277 289 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 TEDDM1Q5T9Z0 273 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 KIRREL3Q8IZU9 778 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 SCG3Q8WXD2 468 aaKnown RBP11.52□□□□□ -0.57
NFKB1-205ENST00000505458 STON2Q8WXE9 905 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 RMDN2Q96LZ7 410 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 ZFP69BQ9UJL9 534 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 TRIM17Q9Y577 477 aa11.52□□□□□ -0.57
NFKB1-205ENST00000505458 SLC38A8A6NNN8 435 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 F5H5T6 163 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 PLIN3O60664 434 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 CCDC22O60826 627 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 RAMP2O60895 175 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 AMHP03971 560 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 MYL4P12829 197 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 BGNP21810 368 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 IKBKEQ14164 716 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 WDR75Q8IWA0 830 aaKnown RBP11.51□□□□□ -0.57
NFKB1-205ENST00000505458 ATAD1Q8NBU5 361 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 ERP27Q96DN0 273 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 SLC13A1Q9BZW2 595 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 LRMDAQ9H2I8 198 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 NPHS2Q9NP85 383 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 RIMKLBQ9ULI2 386 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 SLC12A8A0AV02 714 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 HMX2A2RU54 273 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 TRAFD1O14545 582 aaPredicted RBP11.51□□□□□ -0.57
NFKB1-205ENST00000505458 SNNO75324 88 aaPredicted RBP11.51□□□□□ -0.57
NFKB1-205ENST00000505458 ALDOAP04075 364 aaKnown RBP11.51□□□□□ -0.57
NFKB1-205ENST00000505458 NQO1P15559 274 aaKnown RBP11.51□□□□□ -0.57
NFKB1-205ENST00000505458 OCRLQ01968 901 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 TP53INP2Q8IXH6 220 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 IMP4Q96G21 291 aaKnown RBP11.51□□□□□ -0.57
NFKB1-205ENST00000505458 FICDQ9BVA6 458 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 MAGEH1Q9H213 219 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 KLC4Q9NSK0 619 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 UXTQ9UBK9 157 aaPredicted RBP11.51□□□□□ -0.57
NFKB1-205ENST00000505458 TMEM114B3SHH9 223 aa11.51□□□□□ -0.57
NFKB1-205ENST00000505458 ATP9BO43861 1147 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms