RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 APEHP13798 732 aaKnown RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 HGFP14210 728 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 GABRB1P18505 474 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 CASP3P42574 277 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF135P52742 658 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 EFNA5P52803 228 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 MFAP4P55083 255 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 MTM1Q13496 603 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PFKFB3Q16875 520 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 SMTNL2Q2TAL5 461 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 MANEALQ5VSG8 457 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 CD276Q5ZPR3 534 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 SULT1C3Q6IMI6 304 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PSTKQ8IV42 348 aaKnown RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PI4KAP1Q8N8J0 262 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PIK3C3Q8NEB9 887 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ARHGAP45Q92619 1136 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 LIN37Q96GY3 246 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 SLC23A1Q9UHI7 598 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 IPO11Q9UI26 975 aaKnown RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 DUSP13Q9UII6 198 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PLA2G2DQ9UNK4 145 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ASB1Q9Y576 335 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 RPTORQ8N122 1335 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 GOLGA6L10A0A0M3HER8 536 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 GLOD5A6NK44 160 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 FAM86B1E9PN63 330 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 MYO1CO00159 1063 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 NVLO15381 856 aaKnown RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 KCNQ3O43525 872 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 KCNJ13O60928 360 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 FAM86B2P0C5J1 330 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 UROSP10746 265 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 NID1P14543 1247 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 EDN2P20800 178 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ACVR2AP27037 513 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ERVFC1P60507 584 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 CCDC142Q17RM4 750 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PTCHD3Q3KNS1 767 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 TRAPPC3LQ5T215 181 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 NCEH1Q6PIU2 408 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 CORO6Q6QEF8 472 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 TRAPPC11Q7Z392 1133 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ZDHHC14Q8IZN3 488 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 FSTL5Q8N475 847 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 LILRA3Q8N6C8 439 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 AKR7LQ8NHP1 331 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 NRBF2Q96F24 287 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ZBTB45Q96K62 511 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 GOLPH3LQ9H4A5 285 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 AGPAT3Q9NRZ7 376 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 NRBP2Q9NSY0 501 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 QPCTLQ9NXS2 382 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 MTMR6Q9Y217 621 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF536O15090 1300 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PLK4O00444 970 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PSMD14O00487 310 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 CD3EAPO15446 510 aaKnown RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 SPAG6O75602 509 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 VIPP01282 170 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ZFXP17010 805 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF24P17028 368 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 KLRC1P26715 233 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ADSSP30520 456 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 MDH1P40925 334 aaKnown RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 GRSF1Q12849 480 aaKnown RBP eCLIP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 HS1BP3Q53T59 392 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 IGSF11Q5DX21 431 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF667Q5HYK9 610 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 DAB2IPQ5VWQ8 1189 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ANKRD40Q6AI12 368 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ABLIM2Q6H8Q1 611 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 USP30Q70CQ3 517 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 GPR161Q8N6U8 529 aaKnown RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 WDR48Q8TAF3 677 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ZNF384Q8TF68 577 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 NCLNQ969V3 563 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 ATP6V1G3Q96LB4 118 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 FOXB1Q99853 325 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 LRRCC1Q9C099 1032 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 CTDSP1Q9GZU7 261 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 RAB33BQ9H082 229 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 TMEM117Q9H0C3 514 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 IL1RAPL2Q9NP60 686 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 KLHL9Q9P2J3 617 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 TRPS1Q9UHF7 1281 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 TUBE1Q9UJT0 475 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 CNOT11Q9UKZ1 510 aaKnown RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 BARX2Q9UMQ3 279 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-204ENST00000504430 PCDHB4Q9Y5E5 795 aa5.38□□□□□ -1.55
NIPBL-204ENST00000504430 CETN3O15182 167 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 SEC31AO94979 1220 aaKnown RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 EIF2S1P05198 315 aaKnown RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 GALP22466 123 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 PTGS1P23219 599 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 PTPN7P35236 360 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 LIG4P49917 911 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 EIF3EP60228 445 aaKnown RBP5.37□□□□□ -1.55
NIPBL-204ENST00000504430 CAMK1Q14012 370 aa5.37□□□□□ -1.55
NIPBL-204ENST00000504430 ZIK1Q3SY52 487 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms