RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 OGFOD2Q6N063 350 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 LRRC8EQ6NSJ5 796 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PPP1R18Q6NYC8 613 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 IYDQ6PHW0 289 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 BTNL9Q6UXG8 535 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PID1Q7Z2X4 250 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ASPGQ86U10 573 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 KIAA2013Q8IYS2 634 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CHST13Q8NET6 341 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC2A14Q8TDB8 520 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MTBPQ96DY7 904 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 COX4I2Q96KJ9 171 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 KLHL15Q96M94 604 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NEU1Q99519 415 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 OSBPL6Q9BZF3 934 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 WDR11Q9BZH6 1224 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TMEM117Q9H0C3 514 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ADNPQ9H2P0 1102 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RERGLQ9H628 205 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ACAD9Q9H845 621 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MAGEF1Q9HAY2 307 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ARHGEF4Q9NR80 690 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 AFF4Q9UHB7 1163 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TRPS1Q9UHF7 1281 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF229Q9UJW7 825 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 COG5Q9UP83 839 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 USP15Q9Y4E8 981 aaPredicted RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 UBE4BO95155 1302 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CEP290O15078 2479 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NUMA1Q14980 2115 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CHD5Q8TDI0 1954 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 A0A0A6YYJ9 748 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MEX3AA1L020 520 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RCCD1A6NED2 376 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF98A6NK75 572 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 DBX1A6NMT0 343 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SLCO1B7G3V0H7 640 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 M0QZ92 97 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 DGAT1O75907 488 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NPPAP01160 153 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 UCHL3P15374 230 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ELNP15502 786 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NUDT1P36639 197 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC1A1P43005 524 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ANTXR2P58335 489 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ARHGAP8P85298 464 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 EXOSC10Q01780 885 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PWP1Q13610 501 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RAPSNQ13702 412 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GK3PQ14409 553 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PSMD5Q16401 504 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 KCTD21Q4G0X4 260 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SEZ6Q53EL9 994 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF667Q5HYK9 610 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 C6orf10Q5SRN2 563 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SWSAP1Q6NVH7 229 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ARHGAP11AQ6P4F7 1023 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 HEATR4Q86WZ0 1026 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ERO1BQ86YB8 467 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ARID3BQ8IVW6 561 aaPredicted RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SCN4BQ8IWT1 228 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GUF1Q8N442 669 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC25A41Q8N5S1 370 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TMEM35BQ8NCS4 154 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GIPC3Q8TF64 312 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RAD54LQ92698 747 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 OTULINQ96BN8 352 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 DGCR14Q96DF8 476 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 KLRG1Q96E93 195 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CCDC17Q96LX7 622 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RMDN3Q96TC7 470 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SERPINI1Q99574 410 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TDRD1Q9BXT4 1180 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TMEM39BQ9GZU3 492 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 DUSP15Q9H1R2 295 aaPredicted RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ZC4H2Q9NQZ6 224 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GDF3Q9NR23 364 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RAB6BQ9NRW1 208 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ZNF275Q9NSD4 429 aaPredicted RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 THEGQ9P2T0 379 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 UVRAGQ9P2Y5 699 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RPS6KA6Q9UK32 745 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CDH7Q9ULB5 785 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC8A2Q9UPR5 921 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 STXBP5LQ9Y2K9 1186 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ARL2BPQ9Y2Y0 163 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CSADQ9Y600 493 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ALG6Q9Y672 507 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 FOCADQ5VW36 1801 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ABCB11O95342 1321 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 A0A1B0GTQ1 180 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 UBA6A0AVT1 1052 aaPredicted RBP3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 EFCAB7A8K855 629 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 F5H6K3 240 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 H0Y858 1186 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 MEN1O00255 615 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 TOR1AO14656 332 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 PCDH17O14917 1159 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 SEMA3EO15041 775 aa3.73□□□□□ -1.81
PCDH11X-208ENST00000504220 LILRB5O75023 590 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms