RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 FILIP1LQ4L180 1135 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TDRD12Q587J7 1177 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 KLHDC7AQ5VTJ3 777 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 C8orf82Q6P1X6 216 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TMEM88Q6PEY1 159 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 MEX3BQ6ZN04 569 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 CREBRFQ8IUR6 639 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 RASGRP3Q8IV61 690 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 SAMD3Q8N6K7 520 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 WDSUB1Q8N9V3 476 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 ENGASEQ8NFI3 743 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 OR14A16Q8NHC5 309 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 ADAMTS14Q8WXS8 1223 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 ANKRD9Q96BM1 317 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 EVI5LQ96CN4 794 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 ADAD1Q96M93 576 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TTC14Q96N46 770 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 DUX3Q96PT4 197 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 EPYCQ99645 322 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 NAP1L4Q99733 375 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 NCAPGQ9BPX3 1015 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 WDR77Q9BQA1 342 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 PAGR1Q9BTK6 254 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TEX13AQ9BXU3 409 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 EIF2AQ9BY44 585 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TXNRD2Q9NNW7 524 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 KCNK9Q9NPC2 374 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 MED4Q9NPJ6 270 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 UTP6Q9NYH9 597 aaKnown RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 MYO1AQ9UBC5 1043 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 PLEKHB1Q9UF11 243 aaPredicted RBP2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 TCEAL9Q9UHQ7 104 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 SLC4A4Q9Y6R1 1079 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 LMTK3Q96Q04 1460 aa2.24□□□□□ -2.05
HMGB3P17-201ENST00000504195 EIF4G1Q04637 1599 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 WDR81Q562E7 1941 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PNMA6EA0A0J9YXQ4 647 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC196A0A1B0GTZ2 297 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PABPN1LA6NDY0 278 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 POM121BA6NF01 834 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 J3KTA2 159 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 NPHP1O15259 732 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 IPO8O15397 1037 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 NKX2-8O15522 239 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 ASAP2O43150 1006 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PLIN1O60240 522 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PQBP1O60828 265 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PARNO95453 639 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 S100BP04271 92 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 CHRNB2P17787 502 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 IGFBP2P18065 325 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 GABRB3P28472 473 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 RFX5P48382 616 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 TRPC1P48995 793 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PDLIM4P50479 330 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 EIF5P55010 431 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 POLE2P56282 527 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 HMGN5P82970 282 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 TLE3Q04726 772 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 ACSM2AQ08AH3 577 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 BIRC2Q13490 618 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PLCB4Q15147 1175 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 MAPRE1Q15691 268 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 C1QTNF12Q5T7M4 302 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZNF772Q68DY9 489 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 ANKRD40Q6AI12 368 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 MSANTD2Q6P1R3 559 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 KRT77Q7Z794 578 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 C11orf96Q7Z7L8 435 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 FJX1Q86VR8 437 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 ZSCAN30Q86W11 494 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 KLBQ86Z14 1044 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 DCUN1D3Q8IWE4 304 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 MYO1HQ8N1T3 1032 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 CLIP4Q8N3C7 705 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 DPP10Q8N608 796 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 RNF152Q8N8N0 203 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 CCDC191Q8NCU4 936 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 SLC22A17Q8WUG5 538 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 SYAP1Q96A49 352 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 RMDN2Q96LZ7 410 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 AGAP3Q96P47 875 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PAAF1Q9BRP4 392 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 POLDIP3Q9BY77 421 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 OSBPL5Q9H0X9 879 aaPredicted RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 ABHD16BQ9H3Z7 469 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 TSPY26PQ9H489 355 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 PRDM11Q9NQV5 511 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 HELLSQ9NRZ9 838 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 SMC4Q9NTJ3 1288 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 DONSONQ9NYP3 566 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 CHPF2Q9P2E5 772 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 NRBP1Q9UHY1 535 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 ACAD8Q9UKU7 415 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 CA14Q9ULX7 337 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 NOL7Q9UMY1 257 aaKnown RBP2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 LZTS1Q9Y250 596 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 NINLQ9Y2I6 1382 aa2.23□□□□□ -2.05
HMGB3P17-201ENST00000504195 IL16Q14005 1332 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms