RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 CFHP08603 1231 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 IFNA8P32881 189 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 UBAP2LQ14157 1087 aaKnown RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 BANPQ8N9N5 519 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 IRGQQ8WZA9 623 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 STRA6Q9BX79 667 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ZYG11BQ9C0D3 744 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 EIF2B3Q9NR50 452 aaKnown RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 FBXO6Q9NRD1 293 aaPredicted RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 HBS1LQ9Y450 684 aaKnown RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 DOCK2Q92608 1830 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 PAPSS1O43252 624 aaPredicted RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ENTPD5O75356 428 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 FUT11Q495W5 492 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 DCLRE1AQ6PJP8 1040 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 LGI2Q8N0V4 545 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 CDRT15Q96T59 188 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 EIF2AQ9BY44 585 aaKnown RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 CDH19Q9H159 772 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 RRAGCQ9HB90 399 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 MID1IP1Q9NPA3 183 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM155BO75949 473 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ALBP02768 609 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 WARSP23381 471 aaKnown RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 MAPK1P28482 360 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 NME5P56597 212 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 GRAMD4Q6IC98 578 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 POTEHQ6S545 545 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 CXCL17Q6UXB2 119 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 GLT6D1Q7Z4J2 308 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 LPPQ93052 612 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 PGLYRP2Q96PD5 576 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ACE2Q9BYF1 805 aaPredicted RBP10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 PIDD1Q9HB75 910 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 CATSPERZQ9NTU4 200 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 ARL8BQ9NVJ2 186 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 MARCH2Q9P0N8 246 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 SEPT3Q9UH03 358 aa10.93□□□□□ -0.66
LIMCH1-205ENST00000503057 HTR7P34969 479 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 THEMIS2Q5TEJ8 643 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 CYP4X1Q8N118 509 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 MIER2Q8N344 545 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 CCDC185Q8N715 623 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 DPEP3Q9H4B8 488 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 CAAP1Q9H8G2 361 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 ATP13A1Q9HD20 1204 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 POLG2Q9UHN1 485 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 LTBP3Q9NS15 1303 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 MRASO14807 208 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 HNRNPRO43390 633 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 TKTP29401 623 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 CD86P42081 329 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 ABCG1P45844 678 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 POLD2P49005 469 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 NAA20P61599 178 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 SLC25A3Q00325 362 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 SGO1Q5FBB7 561 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 CMASQ8NFW8 434 aaPredicted RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 RP9Q8TA86 221 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 FAM136AQ96C01 138 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 RMND5AQ9H871 391 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 RBPJLQ9UBG7 517 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 UBA2Q9UBT2 640 aaPredicted RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 FZD10Q9ULW2 581 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 EVPLLA8MZ36 301 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 BTBD19C9JJ37 291 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 HDAC3O15379 428 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 CAPN15O75808 1086 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 SMPD1P17405 629 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 EPHB3P54753 998 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 FRG1Q14331 258 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 SQLEQ14534 574 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 TEX44Q53QW1 395 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 RIPOR1Q6ZS17 1223 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 PIWIL4Q7Z3Z4 852 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 DHFR2Q86XF0 187 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 RELL1Q8IUW5 271 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 RAB42Q8N4Z0 105 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 GANCQ8TET4 914 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 MAML3Q96JK9 1138 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 GBA3Q9H227 469 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 ARHGEF4Q9NR80 690 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 AAASQ9NRG9 546 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 TMCO1Q9UM00 188 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 NDUFAF1Q9Y375 327 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 TRAFD1O14545 582 aaPredicted RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 MGRN1O60291 552 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 USP1O94782 785 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 ATP6V1B1P15313 513 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 SCNN1AP37088 669 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 NAGLUP54802 743 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 SLC25A11Q02978 314 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 DPYSL2Q16555 572 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 ATP6AP1LQ52LC2 224 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 SAMD4BQ5PRF9 694 aaKnown RBP10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 TMCO4Q5TGY1 634 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 ANKS6Q68DC2 871 aa10.92□□□□□ -0.66
LIMCH1-205ENST00000503057 AAGABQ6PD74 315 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms