RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 FAM131BQ86XD5 332 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 SIX6OS1Q8N1H7 587 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 RBM15BQ8NDT2 890 aaKnown RBP12.68□□□□□ -0.38
AFF3-215ENST00000498090 MICAL1Q8TDZ2 1067 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 STON2Q8WXE9 905 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 RSPH1Q8WYR4 309 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 CMTM5Q96DZ9 223 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 PGAP3Q96FM1 320 aaPredicted RBP12.68□□□□□ -0.38
AFF3-215ENST00000498090 PRR11Q96HE9 360 aaPredicted RBP12.68□□□□□ -0.38
AFF3-215ENST00000498090 SUSD3Q96L08 255 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 LGMNQ99538 433 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 TMEM175Q9BSA9 504 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 ARMCX1Q9P291 453 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 COLQQ9Y215 455 aaPredicted RBP12.68□□□□□ -0.38
AFF3-215ENST00000498090 TIMM13Q9Y5L4 95 aaPredicted RBP12.68□□□□□ -0.38
AFF3-215ENST00000498090 CDY1Q9Y6F8 540 aa12.68□□□□□ -0.38
AFF3-215ENST00000498090 CCDC195A0A1B0GUA6 201 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TMEM114B3SHH9 223 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 NT5C1B-RDH14C9J2C7 533 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 M0QZQ0 153 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 DCLK1O15075 740 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 KRT36O76013 467 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 USP1O94782 785 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 AP2A1O95782 977 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 F9P00740 461 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 PROCP04070 461 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 LMO2P25791 158 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TYK2P29597 1187 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 NPY2RP49146 381 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 CSE1LP55060 971 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 ZNF33AQ06730 810 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 ADIGQ0VDE8 80 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 THOC5Q13769 683 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 ARL13BQ3SXY8 428 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 FSCBQ5H9T9 825 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TMCO4Q5TGY1 634 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 RASIP1Q5U651 963 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 METTL21CQ5VZV1 264 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TRIM68Q6AZZ1 485 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 ANO7Q6IWH7 933 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 CHRDL2Q6WN34 429 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TMEM135Q86UB9 458 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TREML1Q86YW5 311 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 CMTR2Q8IYT2 770 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 ULK2Q8IYT8 1036 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 ZNF567Q8N184 647 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 CCNYQ8ND76 341 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 FAM161BQ96MY7 647 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 LBHD1Q9BQE6 289 aaPredicted RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 PRDM12Q9H4Q4 367 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 COPG2Q9UBF2 871 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 EMCNQ9ULC0 261 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 DNAJC16Q9Y2G8 782 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 MRPL42Q9Y6G3 142 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 C2orf71A6NGG8 1288 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 M0QYT0 321 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 GABRDO14764 452 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TIMM44O43615 452 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TBX10O75333 385 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 GJB5O95377 273 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 KITP10721 976 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 PTPN1P18031 435 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 PSMB4P28070 264 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 SERPINB6P35237 376 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 ABL2P42684 1182 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 LIMK2P53671 638 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 ALDH18A1P54886 795 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 SESN2P58004 480 aaPredicted RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 ABCE1P61221 599 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 HTRA4P83105 476 aaPredicted RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 MXRA7P84157 204 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 PPIDQ08752 370 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 PCLAFQ15004 111 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 RABGAP1LQ5R372 815 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 C9orf50Q5SZB4 431 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 PID1Q7Z2X4 250 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 PYROXD2Q8N2H3 581 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 TMEM86AQ8N2M4 240 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
AFF3-215ENST00000498090 RDH11Q8TC12 318 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 WDR60Q8WVS4 1066 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 SCG3Q8WXD2 468 aaKnown RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 JADE3Q92613 823 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 FAM136AQ96C01 138 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 PPP1R2P1Q96PQ5 205 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 RBBP8Q99708 897 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 LPIN3Q9BQK8 851 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 RTP3Q9BQQ7 232 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 CNGB3Q9NQW8 809 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 SYBUQ9NX95 663 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 KLHL8Q9P2G9 620 aaPredicted RBP12.67□□□□□ -0.38
AFF3-215ENST00000498090 RPS6KL1Q9Y6S9 549 aa12.67□□□□□ -0.38
AFF3-215ENST00000498090 PRR5-ARHGAP8B1AHC4 643 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 CYP11A1P05108 521 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 LINC00271P0C7V0 271 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 FAM200BP0CF97 657 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 RALBP11234 206 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 ODC1P11926 461 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 CPA3P15088 417 aa12.66□□□□□ -0.38
AFF3-215ENST00000498090 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms