RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CNOT3O75175 753 aaKnown RBP5.17□□□□□ -1.58
VPS36-206ENST00000497149 CBX6O95503 412 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 DDAH2O95865 285 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 CD72P21854 359 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 CDH15P55291 814 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 RPP30P78346 268 aaKnown RBP5.17□□□□□ -1.58
VPS36-206ENST00000497149 SSBP2P81877 361 aaPredicted RBP5.17□□□□□ -1.58
VPS36-206ENST00000497149 MPP1Q00013 466 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 DDX10Q13206 875 aaKnown RBP5.17□□□□□ -1.58
VPS36-206ENST00000497149 TRIP6Q15654 476 aaKnown RBP5.17□□□□□ -1.58
VPS36-206ENST00000497149 FBXO43Q4G163 708 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 MTX3Q5HYI7 312 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 TTLL5Q6EMB2 1281 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 AAGABQ6PD74 315 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 ZNF793Q6ZN11 406 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 IGFN1Q86VF2 1251 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 CCDC25Q86WR0 208 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 DDIASQ8IXT1 998 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 PCYOX1LQ8NBM8 494 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 PRSS3P2Q8NHM4 247 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 TBC1D22AQ8WUA7 517 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 FAR1Q8WVX9 515 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 TEFMQ96QE5 360 aaKnown RBP5.17□□□□□ -1.58
VPS36-206ENST00000497149 EYA3Q99504 573 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 IFT27Q9BW83 186 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 INTS2Q9H0H0 1204 aaKnown RBP5.17□□□□□ -1.58
VPS36-206ENST00000497149 EPHX3Q9H6B9 360 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 AAMDCQ9H7C9 122 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 SPAG4Q9NPE6 437 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 NLKQ9UBE8 527 aa5.17□□□□□ -1.58
VPS36-206ENST00000497149 SLC25A10Q9UBX3 287 aaPredicted RBP5.17□□□□□ -1.58
VPS36-206ENST00000497149 TRBV5-7A0A0A0MS05 114 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 ADAM10O14672 748 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 TNPO2O14787 897 aaKnown RBP5.16□□□□□ -1.58
VPS36-206ENST00000497149 ABCD3P28288 659 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 SLC16A2P36021 539 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 GGT5P36269 586 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 CCT4P50991 539 aaKnown RBP5.16□□□□□ -1.58
VPS36-206ENST00000497149 C21orf58P58505 322 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 EZH2Q15910 746 aaKnown RBP5.16□□□□□ -1.58
VPS36-206ENST00000497149 RPE65Q16518 533 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 Q4G0T1 1027 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 ALG10Q5BKT4 473 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 ZNF766Q5HY98 468 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 ALG10BQ5I7T1 473 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 PIK3CD-AS1Q5SR53 167 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 ZNF626Q68DY1 528 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 ACAD10Q6JQN1 1059 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 DPY19L2P1Q6NXN4 242 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 SLC22A25Q6T423 547 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 MON1AQ86VX9 555 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 ANKRD13BQ86YJ7 626 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 SLC44A5Q8NCS7 719 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 TNIP2Q8NFZ5 429 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 HDAC7Q8WUI4 952 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 HSPH1Q92598 858 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 ZUFSPQ96AP4 578 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 EME1Q96AY2 570 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 COQ8BQ96D53 544 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 WDR83Q9BRX9 315 aaKnown RBP5.16□□□□□ -1.58
VPS36-206ENST00000497149 ACTR5Q9H9F9 607 aaPredicted RBP5.16□□□□□ -1.58
VPS36-206ENST00000497149 THSD1Q9NS62 852 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 BEX4Q9NWD9 120 aaPredicted RBP5.16□□□□□ -1.58
VPS36-206ENST00000497149 GRHL1Q9NZI5 618 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 FBXO40Q9UH90 709 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 BTBD3Q9Y2F9 522 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 CLDN16Q9Y5I7 305 aa5.16□□□□□ -1.58
VPS36-206ENST00000497149 TTBK1Q5TCY1 1321 aaPredicted RBP5.16□□□□□ -1.58
VPS36-206ENST00000497149 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 C17orf113A0A1B0GUU1 675 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.15□□□□□ -1.59
VPS36-206ENST00000497149 GAGE10A6NGK3 116 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 TLX3O43711 291 aaPredicted RBP5.15□□□□□ -1.59
VPS36-206ENST00000497149 URODP06132 367 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 FBLP22087 321 aaKnown RBP5.15□□□□□ -1.59
VPS36-206ENST00000497149 KRT9P35527 623 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 PAFAH1B1P43034 410 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 CASP6P55212 293 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 SMTNL2Q2TAL5 461 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 PRICKLE4Q2TBC4 344 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 ENTPD8Q5MY95 495 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 C10orf25Q5T742 122 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 MORN5Q5VZ52 161 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 B4GALNT4Q76KP1 1039 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 KDELC2Q7Z4H8 507 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 WDR5BQ86VZ2 330 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS36-206ENST00000497149 GHDCQ8N2G8 530 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 MSI2Q96DH6 328 aaKnown RBP5.15□□□□□ -1.59
VPS36-206ENST00000497149 ZNF419Q96HQ0 510 aaPredicted RBP5.15□□□□□ -1.59
VPS36-206ENST00000497149 TTYH1Q9H313 450 aaPredicted RBP5.15□□□□□ -1.59
VPS36-206ENST00000497149 SEMA4BQ9NPR2 832 aaPredicted RBP5.15□□□□□ -1.59
VPS36-206ENST00000497149 ATP8A2Q9NTI2 1148 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 ZDHHC7Q9NXF8 308 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 PPP1R14DQ9NXH3 145 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 HCN3Q9P1Z3 774 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 CNPY2Q9Y2B0 182 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.15□□□□□ -1.59
VPS36-206ENST00000497149 ZNF804BA4D1E1 1349 aa5.15□□□□□ -1.59
VPS36-206ENST00000497149 ZMYM2Q9UBW7 1377 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms