RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 USP33Q8TEY7 942 aa18.72■□□□□ 0.59
TSSC4-210ENST00000496468 RPL10LQ96L21 214 aaKnown RBP18.72■□□□□ 0.59
TSSC4-210ENST00000496468 NAP1L3Q99457 506 aaPredicted RBP18.72■□□□□ 0.59
TSSC4-210ENST00000496468 COL25A1Q9BXS0 654 aaPredicted RBP18.72■□□□□ 0.59
TSSC4-210ENST00000496468 LMAN1LQ9HAT1 526 aa18.72■□□□□ 0.59
TSSC4-210ENST00000496468 ZDHHC4Q9NPG8 344 aa18.72■□□□□ 0.59
TSSC4-210ENST00000496468 THAP10Q9P2Z0 257 aaPredicted RBP18.72■□□□□ 0.59
TSSC4-210ENST00000496468 HS3ST2Q9Y278 367 aa18.72■□□□□ 0.59
TSSC4-210ENST00000496468 SHROOM3Q8TF72 1996 aa18.72■□□□□ 0.59
TSSC4-210ENST00000496468 NUP205Q92621 2012 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 TECTAO75443 2155 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 J3KR12 359 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 ZNF185O15231 689 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 MAFKO60675 156 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 CHRM1P11229 460 aaPredicted RBP18.71■□□□□ 0.59
TSSC4-210ENST00000496468 PRLRP16471 622 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 NNMTP40261 264 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 CLCN6P51797 869 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 PPIDQ08752 370 aaKnown RBP18.71■□□□□ 0.59
TSSC4-210ENST00000496468 HSF5Q4G112 596 aaPredicted RBP18.71■□□□□ 0.59
TSSC4-210ENST00000496468 TMCO4Q5TGY1 634 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 EMC10Q5UCC4 262 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 LEKR1Q6ZMV7 388 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 METTL3Q86U44 580 aaKnown RBP18.71■□□□□ 0.59
TSSC4-210ENST00000496468 ZC3H18Q86VM9 953 aaKnown RBP18.71■□□□□ 0.59
TSSC4-210ENST00000496468 SH2D3CQ8N5H7 860 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 NSMCE1Q8WV22 266 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 ZNF592Q92610 1267 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 MS4A14Q96JA4 679 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 MRGPRX3Q96LB0 322 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 QKIQ96PU8 341 aaKnown RBP eCLIP18.71■□□□□ 0.59
TSSC4-210ENST00000496468 FAM118BQ9BPY3 351 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 BRD8Q9H0E9 1235 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 CACNA2D2Q9NY47 1150 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 HCN2Q9UL51 889 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 TTC7AQ9ULT0 858 aaPredicted RBP18.71■□□□□ 0.59
TSSC4-210ENST00000496468 SLC8A2Q9UPR5 921 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 SIT1Q9Y3P8 196 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 NCOR1O75376 2440 aa18.71■□□□□ 0.59
TSSC4-210ENST00000496468 ANTXRLA6NF34 631 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 TMCC1O94876 653 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 KLF8O95600 359 aaPredicted RBP18.7■□□□□ 0.58
TSSC4-210ENST00000496468 SRCP12931 536 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 IL12RB1P42701 662 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 VASPP50552 380 aaPredicted RBP18.7■□□□□ 0.58
TSSC4-210ENST00000496468 EIF3EP60228 445 aaKnown RBP18.7■□□□□ 0.58
TSSC4-210ENST00000496468 SLC20A2Q08357 652 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 AP1B1Q10567 949 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 C22orf39Q6P5X5 142 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 CDKL3Q8IVW4 592 aaPredicted RBP18.7■□□□□ 0.58
TSSC4-210ENST00000496468 CCDC13Q8IYE1 715 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 ALLCQ8N6M5 410 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 IL17RCQ8NAC3 791 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 KDM1BQ8NB78 822 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 ACTRT1Q8TDG2 376 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 TFB1MQ8WVM0 346 aaKnown RBP18.7■□□□□ 0.58
TSSC4-210ENST00000496468 CASKIN2Q8WXE0 1202 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 MYO19Q96H55 970 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 CAPZA3Q96KX2 299 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 ZNF599Q96NL3 588 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 LGMNQ99538 433 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 FRMD8P1Q9BZ68 369 aaPredicted RBP18.7■□□□□ 0.58
TSSC4-210ENST00000496468 R3HDM2Q9Y2K5 976 aaKnown RBP18.7■□□□□ 0.58
TSSC4-210ENST00000496468 ACTL7AQ9Y615 435 aa18.7■□□□□ 0.58
TSSC4-210ENST00000496468 A0A0C4DFX4 3053 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 HACD1B0YJ81 288 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 H7C0C1 242 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 MT-CO1P00395 513 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 PRKCHP24723 683 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 CCNCP24863 283 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 NTSR1P30989 418 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 MAGEA9P43362 315 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 RPS9P46781 194 aaKnown RBP18.69■□□□□ 0.58
TSSC4-210ENST00000496468 ATP5OP48047 213 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 ZNF33AQ06730 810 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 XRCC4Q13426 336 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 ZNF235Q14590 738 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 RFTN1Q14699 578 aaPredicted RBP18.69■□□□□ 0.58
TSSC4-210ENST00000496468 PRKD1Q15139 912 aaPredicted RBP18.69■□□□□ 0.58
TSSC4-210ENST00000496468 SLC45A4Q5BKX6 768 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 SDE2Q6IQ49 451 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 TXNDC5Q8NBS9 432 aaKnown RBP18.69■□□□□ 0.58
TSSC4-210ENST00000496468 LRRN4Q8WUT4 740 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 ATG4AQ8WYN0 398 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 CLDN23Q96B33 292 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 TSGA13Q96PP4 275 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 ACOX2Q99424 681 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 CINPQ9BW66 212 aaPredicted RBP18.69■□□□□ 0.58
TSSC4-210ENST00000496468 CEP44Q9C0F1 390 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 CHRDQ9H2X0 955 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 TMEM245Q9H330 911 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 SMARCAL1Q9NZC9 954 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 FCF1Q9Y324 198 aaKnown RBP18.69■□□□□ 0.58
TSSC4-210ENST00000496468 STON1Q9Y6Q2 735 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 TTC28Q96AY4 2481 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 BDP1A6H8Y1 2624 aa18.69■□□□□ 0.58
TSSC4-210ENST00000496468 GOLGA6L10A0A0M3HER8 536 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 ESPNB1AK53 854 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 K7ERQ8 282 aa18.68■□□□□ 0.58
TSSC4-210ENST00000496468 ATP9BO43861 1147 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms