RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 PCDHA11Q9Y5I1 949 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 MYO7AQ13402 2215 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 GBF1Q92538 1859 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 A0A0D9SEW6 157 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 A0A1W2PRU2 124 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 PSMD3O43242 534 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 LPXNO60711 386 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 CLDN11O75508 207 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 ANXA9O76027 345 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 NEBLO76041 1014 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 LATS1O95835 1130 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 MT-CYBP00156 380 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-208ENST00000496081 CA3P07451 260 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 MYL4P12829 197 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 GJA1P17302 382 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 CDC25CP30307 473 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 MDH1P40925 334 aaKnown RBP16.69■□□□□ 0.26
HLA-A-208ENST00000496081 MAGEA10P43363 369 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-208ENST00000496081 GUCY1A3Q02108 690 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 MARC1Q5VT66 337 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 ADGRD1Q6QNK2 874 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 Q6ZNB5 142 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 GSDMBQ8TAX9 411 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 DDX50Q9BQ39 737 aaKnown RBP16.69■□□□□ 0.26
HLA-A-208ENST00000496081 HCFC1R1Q9NWW0 138 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 SYBUQ9NX95 663 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.69■□□□□ 0.26
HLA-A-208ENST00000496081 CHD7Q9P2D1 2997 aa16.69■□□□□ 0.26
HLA-A-208ENST00000496081 DOCK6Q96HP0 2047 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 SCAMP3O14828 347 aaKnown RBP16.68■□□□□ 0.26
HLA-A-208ENST00000496081 RFPL2O75678 378 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 CREB1P16220 341 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 PRKCHP24723 683 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 SLC7A9P82251 487 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 MLLT1Q03111 559 aaPredicted RBP16.68■□□□□ 0.26
HLA-A-208ENST00000496081 GNA12Q03113 381 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 SHHQ15465 462 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 STXBP5Q5T5C0 1151 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 NAPEPLDQ6IQ20 393 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 CASC4Q6P4E1 433 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 CHST9Q7L1S5 443 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 TEX26Q8N6G2 289 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 DNAAF3Q8N9W5 541 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 DCAKDQ8WVC6 231 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 APOL2Q9BQE5 337 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 MAGEH1Q9H213 219 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 CNOT10Q9H9A5 744 aaKnown RBP16.68■□□□□ 0.26
HLA-A-208ENST00000496081 MAN1C1Q9NR34 630 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 ASAH2Q9NR71 780 aa16.68■□□□□ 0.26
HLA-A-208ENST00000496081 A0A1B0GVM2 712 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 TCAF2A6NFQ2 919 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 PRAMEF11O60813 436 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 CKMP06732 381 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 CCR2P41597 374 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 MSH2P43246 934 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 NUMBP49757 651 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 GNGT1P63211 74 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 TNK2Q07912 1038 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 STEAP4Q687X5 459 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 RTL10Q7L3V2 364 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 CCNJLQ8IV13 435 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 OR7D4Q8NG98 312 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 MDM1Q8TC05 714 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 NSMCE1Q8WV22 266 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 PPP1R2P1Q96PQ5 205 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 GCNAQ96QF7 691 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 SELENOSQ9BQE4 189 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 NAT9Q9BTE0 207 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 PDFQ9HBH1 243 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 NT5MQ9NPB1 228 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 CHD9Q3L8U1 2897 aa16.67■□□□□ 0.26
HLA-A-208ENST00000496081 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 A6NNZ2 444 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 CXorf49A8MYA2 514 aaPredicted RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 CLASP2O75122 1294 aaKnown RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 EPCAMP16422 314 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 PGAM1P18669 254 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 HOXD9P28356 352 aaPredicted RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 GEMP55040 296 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 NR1H3Q13133 447 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 ZNF177Q13360 481 aaPredicted RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 TUBB8Q3ZCM7 444 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 TRMT10BQ6PF06 316 aaKnown RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 LEKR1Q6ZMV7 388 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 LINC00523Q86TU6 105 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 TRABD2AQ86V40 505 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 SRRM1Q8IYB3 904 aaKnown RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 SLC44A1Q8WWI5 657 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 TGS1Q96RS0 853 aaKnown RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 SLC46A2Q9BY10 475 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 SLC25A51Q9H1U9 297 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 SMYD2Q9NRG4 433 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 MOCS1Q9NZB8 636 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 BFARQ9NZS9 450 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 TBC1D30Q9Y2I9 924 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 ACTL7BQ9Y614 415 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 CEP290O15078 2479 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 TNRC18O15417 2968 aaPredicted RBP16.66■□□□□ 0.26
HLA-A-208ENST00000496081 TRAV19A0A0A6YYK7 116 aa16.66■□□□□ 0.26
HLA-A-208ENST00000496081 ILVBLA1L0T0 632 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms