RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 PCED1AQ9H1Q7 454 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 CAAP1Q9H8G2 361 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 OR12D3Q9UGF7 316 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 ADAMTS1Q9UHI8 967 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 DNAI1Q9UI46 699 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 ANGPTL2Q9UKU9 493 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 PPM1HQ9ULR3 514 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 SCML1Q9UN30 329 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 WASF3Q9UPY6 502 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 CA5BQ9Y2D0 317 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 BTBD3Q9Y2F9 522 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 ANKRD6Q9Y2G4 727 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 FCF1Q9Y324 198 aaKnown RBP10.87□□□□□ -0.67
NELFE-213ENST00000494956 DAAM1Q9Y4D1 1078 aa10.87□□□□□ -0.67
NELFE-213ENST00000494956 SIGLEC16A6NMB1 481 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 SMTNL1A8MU46 457 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 C10orf142B7Z368 130 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 H0Y8X5 98 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 MCF2LO15068 1137 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 HYAL3O43820 417 aaPredicted RBP10.86□□□□□ -0.67
NELFE-213ENST00000494956 ZNF821O75541 412 aaPredicted RBP10.86□□□□□ -0.67
NELFE-213ENST00000494956 ZMPSTE24O75844 475 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 LRIG2O94898 1065 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 CD160O95971 181 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 ADH1BP00325 375 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 CALB1P05937 261 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 PLEKP08567 350 aaPredicted RBP10.86□□□□□ -0.67
NELFE-213ENST00000494956 SKILP12757 684 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 FERP16591 822 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 TNFAIP3P21580 790 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 GKP32189 559 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 AFF3P51826 1226 aaKnown RBP10.86□□□□□ -0.67
NELFE-213ENST00000494956 GSCP56915 257 aaPredicted RBP10.86□□□□□ -0.67
NELFE-213ENST00000494956 TAS2R38P59533 333 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 KRT83P78385 493 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 ARF5P84085 180 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 GNA12Q03113 381 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 MTA1Q13330 715 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 C6orf118Q5T5N4 469 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 AGBL4Q5VU57 503 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 ACAD10Q6JQN1 1059 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 DNAJC24Q6P3W2 148 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 SCYL2Q6P3W7 929 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 C22orf39Q6P5X5 142 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 STRADAQ7RTN6 431 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 NLRP14Q86W24 1093 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 NAXDQ8IW45 347 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 MCOLN2Q8IZK6 566 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 PNPLA1Q8N8W4 532 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 DCAF4L2Q8NA75 395 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 C3orf20Q8ND61 904 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 OR2T34Q8NGX1 318 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 GRIN3AQ8TCU5 1115 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 CENPIQ92674 756 aaPredicted RBP10.86□□□□□ -0.67
NELFE-213ENST00000494956 KLK6Q92876 244 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 MYOCQ99972 504 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 NAT10Q9H0A0 1025 aaKnown RBP10.86□□□□□ -0.67
NELFE-213ENST00000494956 SLC32A1Q9H598 525 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 HAUS4Q9H6D7 363 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 CBX8Q9HC52 389 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 ATP13A1Q9HD20 1204 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 TM7SF3Q9NS93 570 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 GPATCH2LQ9NWQ4 482 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 FZD4Q9ULV1 537 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 HS3ST2Q9Y278 367 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 PAXBP1Q9Y5B6 917 aa10.86□□□□□ -0.67
NELFE-213ENST00000494956 A0A1B0GTH6 734 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 ILVBLA1L0T0 632 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 LRRC72A6NJI9 287 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 UPK3BL1B0FP48 263 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 C1QTNF9BB2RNN3 333 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 UPK3BL2E5RIL1 263 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 CER1O95813 267 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 C1QTNF9P0C862 333 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 CHRNA3P32297 505 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 GRIA4P48058 902 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 DNA2P51530 1060 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 CLCN6P51797 869 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 TRIP6Q15654 476 aaKnown RBP10.85□□□□□ -0.67
NELFE-213ENST00000494956 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 LRSAM1Q6UWE0 723 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 DPY19L3Q6ZPD9 716 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 ZNF571Q7Z3V5 609 aaPredicted RBP10.85□□□□□ -0.67
NELFE-213ENST00000494956 ADAT2Q7Z6V5 191 aaKnown RBP10.85□□□□□ -0.67
NELFE-213ENST00000494956 CHCHD4Q8N4Q1 142 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 SETD7Q8WTS6 366 aaKnown RBP10.85□□□□□ -0.67
NELFE-213ENST00000494956 PPP1R9BQ96SB3 815 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 C2orf49Q9BVC5 232 aaPredicted RBP10.85□□□□□ -0.67
NELFE-213ENST00000494956 SCNM1Q9BWG6 230 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 TM6SF2Q9BZW4 377 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 ZDHHC5Q9C0B5 715 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 KLC2Q9H0B6 622 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 AASDHPPTQ9NRN7 309 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 ARHGAP20Q9P2F6 1191 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 PPARGC1AQ9UBK2 798 aaKnown RBP10.85□□□□□ -0.67
NELFE-213ENST00000494956 KLK13Q9UKR3 277 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 CABIN1Q9Y6J0 2220 aa10.85□□□□□ -0.67
NELFE-213ENST00000494956 A0A1W2PR77 199 aa10.84□□□□□ -0.67
NELFE-213ENST00000494956 C1QTNF3-AMACRE9PGA6 284 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms