RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 KRT9P35527 623 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 OAZ1P54368 228 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 CDH15P55291 814 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 DDX10Q13206 875 aaKnown RBP4.81□□□□□ -1.64
SMC4-224ENST00000494612 ZNF260Q3ZCT1 412 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 EARS2Q5JPH6 523 aaKnown RBP4.81□□□□□ -1.64
SMC4-224ENST00000494612 PXDC1Q5TGL8 231 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 LRRC8DQ7L1W4 858 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 GALNT7Q86SF2 657 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 CCDC25Q86WR0 208 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 PAQR4Q8N4S7 273 aaPredicted RBP4.81□□□□□ -1.64
SMC4-224ENST00000494612 FAM47BQ8NA70 645 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 OR52N4Q8NGI2 321 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 ZNF398Q8TD17 642 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 KCNG4Q8TDN1 519 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 ZFPM2Q8WW38 1151 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 P2RY11Q96G91 374 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 ZNF419Q96HQ0 510 aaPredicted RBP4.81□□□□□ -1.64
SMC4-224ENST00000494612 FRMD8Q9BZ67 464 aaPredicted RBP4.81□□□□□ -1.64
SMC4-224ENST00000494612 MAF1Q9H063 256 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.81□□□□□ -1.64
SMC4-224ENST00000494612 LMAN2LQ9H0V9 348 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 Q9N2J8 555 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 TMEM184CQ9NVA4 438 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 CD207Q9UJ71 328 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 TBX20Q9UMR3 447 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 CAMK2AQ9UQM7 478 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 BICRAQ9NZM4 1560 aa4.81□□□□□ -1.64
SMC4-224ENST00000494612 DPPA5A6NC42 116 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 FAM90A7PA6NKC0 464 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 FAM90A22PA8MWA6 464 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 FAM90A12PA8MX19 464 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 FAM90A23PA8MXZ1 464 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 TNPO2O14787 897 aaKnown RBP4.8□□□□□ -1.64
SMC4-224ENST00000494612 PER2O15055 1255 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 SPTLC2O15270 562 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 STRNO43815 780 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 TFEBP19484 476 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 ABCD3P28288 659 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 PSMC2P35998 433 aaKnown RBP4.8□□□□□ -1.64
SMC4-224ENST00000494612 PAFAH1B1P43034 410 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 MTNR1AP48039 350 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 CYP2J2P51589 502 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 CASP6P55212 293 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 LINC00205P59089 165 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 VAMP2P63027 116 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 MPP1Q00013 466 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 RHAGQ02094 409 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 GHRHRQ02643 423 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 LMOD3Q0VAK6 560 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 Q4G0T1 1027 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 KIAA1755Q5JYT7 1200 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 FAM171A1Q5VUB5 890 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 HMBOX1Q6NT76 420 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 CYB5R4Q7L1T6 521 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 RSRC2Q7L4I2 434 aaKnown RBP4.8□□□□□ -1.64
SMC4-224ENST00000494612 CHD1LQ86WJ1 897 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 ZDHHC17Q8IUH5 632 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 GHDCQ8N2G8 530 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 SCAIQ8N9R8 606 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 LSM14AQ8ND56 463 aaKnown RBP4.8□□□□□ -1.64
SMC4-224ENST00000494612 TBC1D22AQ8WUA7 517 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 NCSTNQ92542 709 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 ELP4Q96EB1 424 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 KIF1BPQ96EK5 621 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 CD180Q99467 661 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 EYA3Q99504 573 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 CLSTN3Q9BQT9 956 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 UBA5Q9GZZ9 404 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 VPS33BQ9H267 617 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 TTC12Q9H892 705 aaPredicted RBP4.8□□□□□ -1.64
SMC4-224ENST00000494612 PREBQ9HCU5 417 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 NLKQ9UBE8 527 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 DHDHQ9UQ10 334 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 CYP46A1Q9Y6A2 500 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 CECR2Q9BXF3 1484 aa4.8□□□□□ -1.64
SMC4-224ENST00000494612 A0A0A0MQY5 61 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 CYSRT1A8MQ03 144 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 KCNJ18B7U540 433 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 PRR23D1E9PI22 279 aaPredicted RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 TBX18O95935 607 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 PRR23D2P0DMB1 279 aaPredicted RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 ATP5F1P24539 256 aaPredicted RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 HOXD9P28356 352 aaPredicted RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 CHRNA5P30532 468 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 TBL3Q12788 808 aaKnown RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 RALBP1Q15311 655 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 SLC18A3Q16572 532 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 SLC9C1Q4G0N8 1177 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 ACAD10Q6JQN1 1059 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 MON1AQ86VX9 555 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 PCYOX1LQ8NBM8 494 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 UCMAQ8WVF2 138 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 CNOT9Q92600 299 aaKnown RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 COQ8BQ96D53 544 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 FAM118BQ9BPY3 351 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 LBHD1Q9BQE6 289 aaPredicted RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 PIMREGQ9BSJ6 248 aa4.79□□□□□ -1.64
SMC4-224ENST00000494612 NPLQ9BXD5 320 aaPredicted RBP4.79□□□□□ -1.64
SMC4-224ENST00000494612 AGXT2Q9BYV1 514 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms