RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZMPSTE24O75844 475 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 MOCS3O95396 460 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 IGLV3-19P01714 112 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 TCF4P15884 667 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 RHOQP17081 205 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 TGM1P22735 817 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 L1CAMP32004 1257 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 NUMBP49757 651 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 STK19P49842 368 aaPredicted RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 ECT2LQ008S8 904 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 FOXK2Q01167 660 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 RELBQ01201 579 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 GFPT1Q06210 699 aaPredicted RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 SULT2A1Q06520 285 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 CLN3Q13286 438 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 STARD3Q14849 445 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 ACAP1Q15027 740 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 TLR1Q15399 786 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 CA9Q16790 459 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 HNRNPA1L2Q32P51 320 aaKnown RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 TBCELQ5QJ74 424 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 CCDC122Q5T0U0 273 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 C9orf64Q5T6V5 341 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 RNF219Q5W0B1 726 aaPredicted RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 PMS2CLQ68D20 193 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 SDE2Q6IQ49 451 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 LRRC31Q6UY01 552 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 TFAP2DQ7Z6R9 452 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 CCDC117Q8IWD4 279 aaPredicted RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 FRMD1Q8N878 549 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 DCAF4L2Q8NA75 395 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 OR2T3Q8NH03 318 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 RLN3Q8WXF3 142 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 PTPRN2Q92932 1015 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 TBC1D31Q96DN5 1066 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 ERLEC1Q96DZ1 483 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 RPL10LQ96L21 214 aaKnown RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 SNRNP25Q9BV90 132 aaKnown RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 PACSIN1Q9BY11 444 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 ZYG11BQ9C0D3 744 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 MTG2Q9H4K7 406 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 NOL6Q9H6R4 1146 aaKnown RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 FBRSQ9HAH7 460 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 MRPL47Q9HD33 250 aaKnown RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 GPATCH2LQ9NWQ4 482 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 SCHIP1Q9P0W5 487 aaPredicted RBP8.99□□□□□ -0.97
ITGB1-217ENST00000494395 MYO1AQ9UBC5 1043 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 SLCO3A1Q9UIG8 710 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 PLA2G4CQ9UP65 541 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 INVSQ9Y283 1065 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 HRH3Q9Y5N1 445 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 SDK1Q7Z5N4 2213 aa8.99□□□□□ -0.97
ITGB1-217ENST00000494395 RIF1Q5UIP0 2472 aaKnown RBP8.98□□□□□ -0.97
ITGB1-217ENST00000494395 ZFHX2Q9C0A1 2572 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-217ENST00000494395 SOWAHDA6NJG2 315 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 TTC34A8MYJ7 566 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 SNAP91O60641 907 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 EPN2O95208 641 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 RHOCP08134 193 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 TPM1P09493 284 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 GLDCP23378 1020 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 IL1R2P27930 398 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 MIPP30301 263 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 OR1E1P30953 314 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 PCK1P35558 622 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 MAPKAPK2P49137 400 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 LPAL2Q16609 132 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 USP39Q53GS9 565 aaKnown RBP8.98□□□□□ -0.97
ITGB1-217ENST00000494395 EFHC2Q5JST6 749 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 ERMARDQ5T6L9 678 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 DAB2IPQ5VWQ8 1189 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 SCYL2Q6P3W7 929 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 ZNF783Q6ZMS7 281 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 PRR23BQ6ZRT6 265 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 CEP68Q76N32 757 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 TMPRSS6Q8IU80 811 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 PSTKQ8IV42 348 aaKnown RBP8.98□□□□□ -0.97
ITGB1-217ENST00000494395 DCLK2Q8N568 766 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 SH2D3CQ8N5H7 860 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 OR7D4Q8NG98 312 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 RUBCNQ92622 972 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 HPS1Q92902 700 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 LOXL4Q96JB6 756 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 BTBD6Q96KE9 485 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 NUP85Q9BW27 656 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 ACE2Q9BYF1 805 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-217ENST00000494395 RSPH9Q9H1X1 276 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-217ENST00000494395 NHEJ1Q9H9Q4 299 aaPredicted RBP8.98□□□□□ -0.97
ITGB1-217ENST00000494395 PRDM16Q9HAZ2 1276 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 ITM2CQ9NQX7 267 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 BCCIPQ9P287 314 aaKnown RBP eCLIP8.98□□□□□ -0.97
ITGB1-217ENST00000494395 SUN2Q9UH99 717 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 VPS51Q9UID3 782 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 ANAPC7Q9UJX3 599 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 VPS28Q9UK41 221 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 AP4E1Q9UPM8 1137 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 HS3ST2Q9Y278 367 aa8.98□□□□□ -0.97
ITGB1-217ENST00000494395 EDDM13A0A1B0GTR0 161 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 CXorf51AA0A1B0GTR3 108 aa8.97□□□□□ -0.97
ITGB1-217ENST00000494395 TARSL2A2RTX5 802 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms