RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SNRPB2P08579 225 aaKnown RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 ITGA2P17301 1181 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 TTMPQ5BVD1 217 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 ABRAXAS1Q6UWZ7 409 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 TSHZ1Q6ZSZ6 1077 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 DEPDC4Q8N2C3 294 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 KBTBD8Q8NFY9 601 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 MYDGFQ969H8 173 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 CIPCQ9C0C6 399 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 SPATC1LQ9H0A9 340 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 MORF4L1Q9UBU8 362 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 RSL24D1Q9UHA3 163 aaKnown RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 ATP6V1HQ9UI12 483 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 ZNF112Q9UJU3 913 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 NFASCO94856 1347 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 KPNA5O15131 536 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 UQCRBP14927 111 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 MAPK8P45983 427 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 C3orf67Q6ZVT6 689 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 ALLCQ8N6M5 410 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 NKX2-3Q8TAU0 364 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 WNT8BQ93098 351 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 MTG1Q9BT17 334 aaPredicted RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 OSGEPL1Q9H4B0 414 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 SPAG4Q9NPE6 437 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 SAE1Q9UBE0 346 aaPredicted RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 SGTAO43765 313 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 ENDOD1O94919 500 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 AUHQ13825 339 aaKnown RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 RGS21Q2M5E4 152 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 NEK5Q6P3R8 708 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 SMAD5Q99717 465 aaKnown RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 KLHL1Q9NR64 748 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 MRPS22P82650 360 aaKnown RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 ZNF621Q6ZSS3 439 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 PPP3R2Q96LZ3 170 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 SPATA5L1Q9BVQ7 753 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 RPRD1BQ9NQG5 326 aaKnown RBP20.4■□□□□ 0.86
RNF40-203ENST00000493683 ENTPD4Q9Y227 616 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 CRYL1Q9Y2S2 319 aa20.4■□□□□ 0.86
RNF40-203ENST00000493683 CPS1P31327 1500 aa20.39■□□□□ 0.86
RNF40-203ENST00000493683 PTGES3LE9PB15 166 aa20.39■□□□□ 0.86
RNF40-203ENST00000493683 MFN2O95140 757 aa20.39■□□□□ 0.86
RNF40-203ENST00000493683 COX7A2P14406 83 aa20.39■□□□□ 0.86
RNF40-203ENST00000493683 TUFMP49411 452 aaKnown RBP20.39■□□□□ 0.86
RNF40-203ENST00000493683 CRY1Q16526 586 aa20.39■□□□□ 0.86
RNF40-203ENST00000493683 ART4Q93070 314 aa20.39■□□□□ 0.86
RNF40-203ENST00000493683 NWD1Q149M9 1564 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 LIASO43766 372 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 ECDO95905 644 aaPredicted RBP20.39■□□□□ 0.85
RNF40-203ENST00000493683 ATP6V1C1P21283 382 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 GSTM5P46439 218 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 RPL5P46777 297 aaKnown RBP20.39■□□□□ 0.85
RNF40-203ENST00000493683 EPS8L1Q8TE68 723 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 RGSL1A5PLK6 1076 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 LACTBL1A8MY62 500 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 CATP04040 527 aaKnown RBP20.39■□□□□ 0.85
RNF40-203ENST00000493683 ANXA5P08758 320 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 CXCR2P25025 360 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 NTSP30990 170 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 SHMT1P34896 483 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 ATP12AP54707 1039 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 CSNK2BP67870 215 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 RFX4Q33E94 735 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 PIWIL4Q7Z3Z4 852 aaKnown RBP20.39■□□□□ 0.85
RNF40-203ENST00000493683 SLC2A14Q8TDB8 520 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 S100ZQ8WXG8 99 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 PCDHB12Q9Y5F1 795 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 CASTOR2A6NHX0 329 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 COX4I1P13073 169 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 ZNF143P52747 638 aaPredicted RBP20.39■□□□□ 0.85
RNF40-203ENST00000493683 PCBP1Q15365 356 aaKnown RBP eCLIP20.39■□□□□ 0.852e-8■■■■■ 47.3
RNF40-203ENST00000493683 FAM180AQ6UWF9 173 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 SMIM5Q71RC9 77 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 DHDDSQ86SQ9 333 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 SFRP1Q8N474 314 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 ZSWIM2Q8NEG5 633 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 TSPAN14Q8NG11 270 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 OR7A2PQ8NGA2 310 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 HSFY1Q96LI6 401 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 NFKBIZQ9BYH8 718 aa20.39■□□□□ 0.85
RNF40-203ENST00000493683 FAM86B1E9PN63 330 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 SMIM22K7EJ46 135 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 ZW10O43264 779 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 FAM86B2P0C5J1 330 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 BOP1Q14137 746 aaKnown RBP20.38■□□□□ 0.85
RNF40-203ENST00000493683 POLNQ7Z5Q5 900 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 NACC2Q96BF6 587 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 SLC39A8Q9C0K1 460 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 HLA-DQA1Q5Y7H0 255 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 ZCCHC23Q6ZST2 131 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 C8orf4Q9NR00 106 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 THG1LQ9NWX6 298 aaKnown RBP20.38■□□□□ 0.85
RNF40-203ENST00000493683 ZNF624Q9P2J8 865 aaPredicted RBP20.38■□□□□ 0.85
RNF40-203ENST00000493683 ARIH1Q9Y4X5 557 aaPredicted RBP20.38■□□□□ 0.85
RNF40-203ENST00000493683 PARNO95453 639 aaKnown RBP20.38■□□□□ 0.85
RNF40-203ENST00000493683 NDUFAF6Q330K2 333 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 LYPLAL1Q5VWZ2 237 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 USP45Q70EL2 814 aa20.38■□□□□ 0.85
RNF40-203ENST00000493683 TFAP2DQ7Z6R9 452 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms