RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 FRMD1Q8N878 549 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 ACRBPQ8NEB7 543 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 PTPRN2Q92932 1015 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 HMCESQ96FZ2 354 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 ZC3H10Q96K80 434 aaKnown RBP13.06□□□□□ -0.32
CLIP2-209ENST00000493166 CCDC114Q96M63 670 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 CSPG4P5Q96PW8 444 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 HINFPQ9BQA5 517 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 RSPH9Q9H1X1 276 aaPredicted RBP13.06□□□□□ -0.32
CLIP2-209ENST00000493166 LRRC19Q9H756 370 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 CD93Q9NPY3 652 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 KLHL11Q9NVR0 708 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 USP36Q9P275 1121 aaKnown RBP13.06□□□□□ -0.32
CLIP2-209ENST00000493166 NCDNQ9UBB6 729 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 SDK1Q7Z5N4 2213 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 ZNF292O60281 2723 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 A0A0A6YYK5 440 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 ZSCAN5CA6NGD5 496 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 ARHGAP42A6NI28 874 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 SMAD6O43541 496 aaKnown RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 KDELR3O43731 214 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 SPOPO43791 374 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 RHOBTB1O94844 696 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 SLC1A1P43005 524 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 PSMD8P48556 350 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 TPMTP51580 245 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 HADHBP55084 474 aaKnown RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 ZBTB16Q05516 673 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 SERINC3Q13530 473 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 PLK5Q496M5 336 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 C22orf39Q6P5X5 142 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 TMCO3Q6UWJ1 677 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 SLC36A4Q6YBV0 504 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 DSG4Q86SJ6 1040 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 MMAAQ8IVH4 418 aaKnown RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 KCTD6Q8NC69 237 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 OR8D1Q8WZ84 308 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 CELF6Q96J87 481 aaKnown RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 CALN1Q9BXU9 219 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 CEP44Q9C0F1 390 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 DUSP15Q9H1R2 295 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 ITM2CQ9NQX7 267 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 RCOR3Q9P2K3 495 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 MBD1Q9UIS9 605 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 GMEB2Q9UKD1 530 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 SCML1Q9UN30 329 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 REXO2Q9Y3B8 237 aaKnown RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 CFAP54Q96N23 3096 aa13.05□□□□□ -0.32
CLIP2-209ENST00000493166 TP53BP1Q12888 1972 aaPredicted RBP13.05□□□□□ -0.32
CLIP2-209ENST00000493166 DMXL1Q9Y485 3027 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 CXorf51AA0A1B0GTR3 108 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 ALOX15BO15296 676 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 BUB1O43683 1085 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 BUB1BO60566 1050 aaPredicted RBP13.04□□□□□ -0.32
CLIP2-209ENST00000493166 NDUFS2O75306 463 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 IL1BP01584 269 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 CD48P09326 243 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 COMTP21964 271 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 AMPD1P23109 780 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 CD6P30203 668 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 OXTRP30559 389 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 RECQLP46063 649 aaPredicted RBP13.04□□□□□ -0.32
CLIP2-209ENST00000493166 VAV2P52735 878 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 NAP1L1P55209 391 aaKnown RBP13.04□□□□□ -0.32
CLIP2-209ENST00000493166 RPL6Q02878 288 aaKnown RBP13.04□□□□□ -0.32
CLIP2-209ENST00000493166 MMRN1Q13201 1228 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 DPYSL3Q14195 570 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 PDK2Q15119 407 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 CST6Q15828 149 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 ATP13A4Q4VNC1 1196 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 PMS2CLQ68D20 193 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 LEKR1Q6ZMV7 388 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 LPCAT2Q7L5N7 544 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 FAM124AQ86V42 546 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 MAP7D3Q8IWC1 876 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 TXLNBQ8N3L3 684 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 LZTR1Q8N653 840 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 PCDH20Q8N6Y1 951 aaKnown RBP13.04□□□□□ -0.32
CLIP2-209ENST00000493166 NPWQ8N729 165 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 FAM71BQ8TC56 605 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 GANCQ8TET4 914 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 TSC1Q92574 1164 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 RUBCNQ92622 972 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 SLC39A8Q9C0K1 460 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 KLC2Q9H0B6 622 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 TNKS2Q9H2K2 1166 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 PABPC3Q9H361 631 aaKnown RBP13.04□□□□□ -0.32
CLIP2-209ENST00000493166 FCF1Q9Y324 198 aaKnown RBP13.04□□□□□ -0.32
CLIP2-209ENST00000493166 HYOU1Q9Y4L1 999 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 ACTL7AQ9Y615 435 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 PI4KAP42356 2102 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 OTOGLQ3ZCN5 2332 aa13.04□□□□□ -0.32
CLIP2-209ENST00000493166 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.03□□□□□ -0.32
CLIP2-209ENST00000493166 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
CLIP2-209ENST00000493166 C1QTNF3-AMACRE9PGA6 284 aa13.03□□□□□ -0.32
CLIP2-209ENST00000493166 DFFAO00273 331 aa13.03□□□□□ -0.32
CLIP2-209ENST00000493166 MCF2LO15068 1137 aa13.03□□□□□ -0.32
CLIP2-209ENST00000493166 MID1O15344 667 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms