RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-209	ENST00000490869	CHRNA3	P32297	505 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	CLCN6	P51797	869 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	C15orf59	Q2T9L4	293 aa	Predicted RBP	11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	INAVA	Q3KP66	663 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	CCDC14	Q49A88	953 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	RAB6C	Q53S08	254 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	PRAMEF14	Q5SWL7	426 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	ARTN	Q5T4W7	220 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	NAPEPLD	Q6IQ20	393 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	ZNF783	Q6ZMS7	281 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	TRIM72	Q6ZMU5	477 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	TRIM69	Q86WT6	500 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	NEK11	Q8NG66	645 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	OR7D4	Q8NG98	312 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	OR2A12	Q8NGT7	310 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	JOSD2	Q8TAC2	188 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	RXFP2	Q8WXD0	754 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	SPON2	Q9BUD6	331 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	RAB6C	Q9H0N0	254 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	GDF3	Q9NR23	364 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	TOR4A	Q9NXH8	423 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	ARHGAP20	Q9P2F6	1191 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	PPARGC1A	Q9UBK2	798 aa	Known RBP	11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	ZNF212	Q9UDV6	495 aa		11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	LIMA1	Q9UHB6	759 aa	Known RBP	11.16	□□□□□ -0.62
UBA1-209	ENST00000490869	C2CD4B	A6NLJ0	364 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	LGALS16	A8MUM7	142 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	TLR4	O00206	839 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	CBX4	O00257	560 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	KPNA3	O00505	521 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	SMAD6	O43541	496 aa	Known RBP	11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	TNFSF14	O43557	240 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	GJB6	O95452	261 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	UNG	P13051	313 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	CDK11B	P21127	795 aa	Known RBP	11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	NUDT1	P36639	197 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	RECQL	P46063	649 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	NSF	P46459	744 aa	Known RBP	11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	NXPH1	P58417	271 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	GNA12	Q03113	381 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	UBXN1	Q04323	297 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	PTP4A2	Q12974	167 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	SHB	Q15464	509 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	ARL13B	Q3SXY8	428 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	PIP5KL1	Q5T9C9	394 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	RETSAT	Q6NUM9	610 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	C22orf39	Q6P5X5	142 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	GATAD2A	Q86YP4	633 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	DRC7	Q8IY82	874 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	MFSD2A	Q8NA29	543 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	CHST14	Q8NCH0	376 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	TMIE	Q8NEW7	156 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	ARRDC3	Q96B67	414 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	PCDHB18P	Q96TA0	734 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	TNKS2	Q9H2K2	1166 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	PREB	Q9HCU5	417 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	ATP13A1	Q9HD20	1204 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	DYRK4	Q9NR20	520 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	FTSJ1	Q9UET6	329 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	DMTF1	Q9Y222	760 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	TP53BP1	Q12888	1972 aa	Predicted RBP	11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	CACNA1E	Q15878	2313 aa		11.15	□□□□□ -0.62
UBA1-209	ENST00000490869	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.15	□□□□□ -0.63
UBA1-209	ENST00000490869	YKT6	O15498	198 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	RNGTT	O60942	597 aa	Known RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	ZMPSTE24	O75844	475 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	DKK1	O94907	266 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	PRNP	P04156	253 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	ITGAV	P06756	1048 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	KRT3	P12035	628 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	EPHA8	P29322	1005 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	ADRA1B	P35368	520 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	PTPN9	P43378	593 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	ARRB1	P49407	418 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	SERPINH1	P50454	418 aa	Known RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	GSC	P56915	257 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	TAS2R38	P59533	333 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	ARF5	P84085	180 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	NRG1	Q02297	640 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	CCDC15	Q0P6D6	951 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	STAT4	Q14765	748 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	CLEC16A	Q2KHT3	1053 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	SETMAR	Q53H47	684 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	CCDC183	Q5T5S1	534 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	RWDD4	Q6NW29	188 aa	Known RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	DPY19L3	Q6ZPD9	716 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	STRADA	Q7RTN6	431 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	GRIN3A	Q8TCU5	1115 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	SAP25	Q8TEE9	199 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	ERGIC2	Q96RQ1	377 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	SELENOO	Q9BVL4	669 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	CEP44	Q9C0F1	390 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	SEPT11	Q9NVA2	429 aa	Known RBP	11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	ADAM22	Q9P0K1	906 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	OR12D3	Q9UGF7	316 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	IL36A	Q9UHA7	158 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	ACACB	O00763	2458 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869	PCNX2	A6NKB5	2137 aa		11.14	□□□□□ -0.63
UBA1-209	ENST00000490869		A0A1W2PQU0	124 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms