RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 SCYL2Q6P3W7 929 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 ZNF571Q7Z3V5 609 aaPredicted RBP20.21■□□□□ 0.83
SMC4-222ENST00000490207 SLFN11Q7Z7L1 901 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 NLRP14Q86W24 1093 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 OR14C36Q8NHC7 312 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 PIP4K2CQ8TBX8 421 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 CNPY3Q9BT09 278 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 MAGEB5Q9BZ81 275 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 SLC32A1Q9H598 525 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 RETREG1Q9H6L5 497 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 TM9SF3Q9HD45 589 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 OSGEPQ9NPF4 335 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 TMEM248Q9NWD8 314 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 SARDHQ9UL12 918 aa20.21■□□□□ 0.83
SMC4-222ENST00000490207 FARP1Q9Y4F1 1045 aaPredicted RBP20.21■□□□□ 0.83
SMC4-222ENST00000490207 UPK3BL1B0FP48 263 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 UPK3BL2E5RIL1 263 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 K7ERQ8 282 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 PLK4O00444 970 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 GJB3O75712 270 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 CER1O95813 267 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 CEACAM1P13688 526 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 ETFBP38117 255 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 GRIA4P48058 902 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 SERPINH1P50454 418 aaKnown RBP20.2■□□□□ 0.82
SMC4-222ENST00000490207 UBASH3AP57075 661 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 BNC1Q01954 994 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 RETSATQ6NUM9 610 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 IL27RAQ6UWB1 636 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.2■□□□□ 0.82
SMC4-222ENST00000490207 ORAI3Q9BRQ5 295 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 NDFIP2Q9NV92 336 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 PARVAQ9NVD7 372 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 PPM1HQ9ULR3 514 aa20.2■□□□□ 0.82
SMC4-222ENST00000490207 A0A1B0GVT2 93 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 SLC7A4O43246 635 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 SMAD6O43541 496 aaKnown RBP20.19■□□□□ 0.82
SMC4-222ENST00000490207 ZMPSTE24O75844 475 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 CSNK1EP49674 416 aaKnown RBP20.19■□□□□ 0.82
SMC4-222ENST00000490207 AIF1P55008 147 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 ARF5P84085 180 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 OGDHQ02218 1023 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 POM121L1PQ3SYA9 428 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 TMC6Q7Z403 805 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 PIP4P1Q86T03 277 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 OR2A12Q8NGT7 310 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 FAM131CQ96AQ9 280 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 DNAI1Q9UI46 699 aa20.19■□□□□ 0.82
SMC4-222ENST00000490207 A0A1W2PPC4 97 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 A0A1W2PQJ5 194 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 DDX3XO00571 662 aaKnown RBP eCLIP20.18■□□□□ 0.82
SMC4-222ENST00000490207 PLRG1O43660 514 aaKnown RBP20.18■□□□□ 0.82
SMC4-222ENST00000490207 CTSLP07711 333 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 GZMAP12544 262 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 SKILP12757 684 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 CD59P13987 128 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 PSMA2P25787 234 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 PMLP29590 882 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 L1CAMP32004 1257 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 CHRNA3P32297 505 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 ACVRL1P37023 503 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 PBX1P40424 430 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 RECQLP46063 649 aaPredicted RBP20.18■□□□□ 0.82
SMC4-222ENST00000490207 CCR5P51681 352 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 CNTN1Q12860 1018 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 SLC14A1Q13336 389 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 MAMLD1Q13495 774 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 SKOR2Q2VWA4 1001 aaPredicted RBP20.18■□□□□ 0.82
SMC4-222ENST00000490207 TDRD12Q587J7 1177 aaKnown RBP20.18■□□□□ 0.82
SMC4-222ENST00000490207 AGBL4Q5VU57 503 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 PLEKHA7Q6IQ23 1121 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 LAYNQ6UX15 382 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 ADAT2Q7Z6V5 191 aaKnown RBP20.18■□□□□ 0.82
SMC4-222ENST00000490207 DNAAF5Q86Y56 855 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 PYROXD2Q8N2H3 581 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 ARHGEF2Q92974 986 aaKnown RBP20.18■□□□□ 0.82
SMC4-222ENST00000490207 SLC6A18Q96N87 628 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 ACE2Q9BYF1 805 aaPredicted RBP20.18■□□□□ 0.82
SMC4-222ENST00000490207 CEP44Q9C0F1 390 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 TNKS2Q9H2K2 1166 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 GAREM1Q9H706 876 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 TPX2Q9ULW0 747 aaKnown RBP20.18■□□□□ 0.82
SMC4-222ENST00000490207 FZD10Q9ULW2 581 aa20.18■□□□□ 0.82
SMC4-222ENST00000490207 C10orf142B7Z368 130 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 RAMP2O60895 175 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 RTN2O75298 545 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 PPP2CBP62714 309 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 PPP2CAP67775 309 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 SLC20A2Q08357 652 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 PCDH20Q8N6Y1 951 aaKnown RBP20.17■□□□□ 0.82
SMC4-222ENST00000490207 CHST14Q8NCH0 376 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 GRIN3AQ8TCU5 1115 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 ZNF653Q96CK0 615 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 EPAS1Q99814 870 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 KDM4CQ9H3R0 1056 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 IL21RQ9HBE5 538 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 IL36AQ9UHA7 158 aa20.17■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3DA0A087WVF3 549 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3IA0A087WXS9 549 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3EA0A087X179 549 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms