RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 STK19P49842 368 aaPredicted RBP17.81■□□□□ 0.44
ERCC3-207ENST00000490062 NRLP54845 237 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 RWDD2BP57060 319 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 TFDP3Q5H9I0 405 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 KIAA1211LQ6NV74 962 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 SPOCD1Q6ZMY3 1216 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 PLD5Q8N7P1 536 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 TSTD1Q8NFU3 115 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 PTPRN2Q92932 1015 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 RPL10LQ96L21 214 aaKnown RBP17.81■□□□□ 0.44
ERCC3-207ENST00000490062 ALS2CR12Q96Q35 445 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 IRF2BPLQ9H1B7 796 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 LZTFL1Q9NQ48 299 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 KCND1Q9NSA2 647 aa17.81■□□□□ 0.44
ERCC3-207ENST00000490062 ARIH1Q9Y4X5 557 aaPredicted RBP17.81■□□□□ 0.44
ERCC3-207ENST00000490062 NYNRINQ9P2P1 1898 aaKnown RBP17.8■□□□□ 0.44
ERCC3-207ENST00000490062 hCG_1818297A0A087WSY0 165 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 ALOX15BO15296 676 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 DDX3YO15523 660 aaKnown RBP17.8■□□□□ 0.44
ERCC3-207ENST00000490062 SYNCRIPO60506 623 aaKnown RBP17.8■□□□□ 0.44
ERCC3-207ENST00000490062 ALDH1A2O94788 518 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 MT-CO1P00395 513 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 EPHX1P07099 455 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 SP9P0CG40 484 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 PAPOLAP51003 745 aaKnown RBP17.8■□□□□ 0.44
ERCC3-207ENST00000490062 COPAP53621 1224 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 ZNF33AQ06730 810 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 IL10RBQ08334 325 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 GALNT2Q10471 571 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 TFDP2Q14188 446 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 RFTN1Q14699 578 aaPredicted RBP17.8■□□□□ 0.44
ERCC3-207ENST00000490062 ZFYVE27Q5T4F4 411 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 C9orf64Q5T6V5 341 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 WDR5BQ86VZ2 330 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 PCDH20Q8N6Y1 951 aaKnown RBP17.8■□□□□ 0.44
ERCC3-207ENST00000490062 UBL4BQ8N7F7 174 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 ZBTB44Q8NCP5 570 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 OR2T3Q8NH03 318 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 ALG3Q92685 438 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 RNF25Q96BH1 459 aaPredicted RBP17.8■□□□□ 0.44
ERCC3-207ENST00000490062 CELF6Q96J87 481 aaKnown RBP17.8■□□□□ 0.44
ERCC3-207ENST00000490062 ZNF599Q96NL3 588 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 TSGA13Q96PP4 275 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 PRSS16Q9NQE7 514 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 MFHAS1Q9Y4C4 1052 aa17.8■□□□□ 0.44
ERCC3-207ENST00000490062 GOLGA6L9A6NEM1 432 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 TTC34A8MYJ7 566 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 MFSD11O43934 449 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 ZNF821O75541 412 aaPredicted RBP17.79■□□□□ 0.44
ERCC3-207ENST00000490062 HLA-EP13747 358 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 GABRG2P18507 467 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 MX2P20592 715 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 WASP42768 502 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 ZBTB16Q05516 673 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 TCF15Q12870 199 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 ELAVL3Q14576 367 aaKnown RBP17.79■□□□□ 0.44
ERCC3-207ENST00000490062 DLG2Q15700 870 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 ODF2Q5BJF6 829 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 TMCO4Q5TGY1 634 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 MEI1Q5TIA1 1274 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 PRSS33Q8NF86 280 aa17.79■□□□□ 0.44
ERCC3-207ENST00000490062 RSPH9Q9H1X1 276 aaPredicted RBP17.79■□□□□ 0.44
ERCC3-207ENST00000490062 POLR3BQ9NW08 1133 aaPredicted RBP17.79■□□□□ 0.44
ERCC3-207ENST00000490062 IPO11Q9UI26 975 aaKnown RBP17.79■□□□□ 0.44
ERCC3-207ENST00000490062 PLXND1Q9Y4D7 1925 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 TCRBV21S2A2A0A5A6 115 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 APOL1O14791 398 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 SMAD6O43541 496 aaKnown RBP17.78■□□□□ 0.44
ERCC3-207ENST00000490062 MAFKO60675 156 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 LILRB5O75023 590 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 SIN3BO75182 1162 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 FTCDO95954 541 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 PEX11BO96011 259 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 TNNT1P13805 278 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 TGM2P21980 687 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 NR2C2P49116 596 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 CSTF1Q05048 431 aaKnown RBP17.78■□□□□ 0.44
ERCC3-207ENST00000490062 C22orf39Q6P5X5 142 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 BBS12Q6ZW61 710 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 LONP2Q86WA8 852 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 TP53INP2Q8IXH6 220 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 ATP11CQ8NB49 1132 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 MDGA1Q8NFP4 955 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 HDAC11Q96DB2 347 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 MRGPRX1Q96LB2 322 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 OLFM3Q96PB7 478 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 HHIPQ96QV1 700 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 MAK16Q9BXY0 300 aaKnown RBP17.78■□□□□ 0.44
ERCC3-207ENST00000490062 MKRN2Q9H000 416 aaKnown RBP17.78■□□□□ 0.44
ERCC3-207ENST00000490062 ZSCAN32Q9NX65 697 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 DTLQ9NZJ0 730 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 PCDHGA2Q9Y5H1 932 aa17.78■□□□□ 0.44
ERCC3-207ENST00000490062 K7ERQ8 282 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 MCF2LO15068 1137 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 GSRP00390 522 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 IGLV3-19P01714 112 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 NDUFV2P19404 249 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 CNR2P34972 360 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 GARSP41250 739 aaKnown RBP17.77■□□□□ 0.44
ERCC3-207ENST00000490062 PTPN5P54829 565 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms