RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, human

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-218	ENST00000490032	OSGIN2	Q9Y236	505 aa		4.11	□□□□□ -1.75
HMGN1-218	ENST00000490032	RAP2C	Q9Y3L5	183 aa		4.11	□□□□□ -1.75
HMGN1-218	ENST00000490032	LDB2	O43679	373 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	LIAS	O43766	372 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	PPP1R3D	O95685	299 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	IFIT2	P09913	472 aa	Known RBP	4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	SETSIP	P0DME0	302 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	FCGR2A	P12318	317 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	GSTM2	P28161	218 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	SERPINB3	P29508	390 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	SERPINA4	P29622	427 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	PPP3CC	P48454	512 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	ART1	P52961	327 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	GAS1	P54826	345 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	RRP1	P56182	461 aa	Known RBP	4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	TNFAIP2	Q03169	654 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	HYAL1	Q12794	435 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	KIF5A	Q12840	1032 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	TRAF2	Q12933	501 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	HNF4G	Q14541	408 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	ZNF284	Q2VY69	593 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	MAP9	Q49MG5	647 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	GXYLT1	Q4G148	440 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	HEPHL1	Q6MZM0	1159 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	GGT6	Q6P531	493 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	KLHL17	Q6TDP4	642 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	RNF144B	Q7Z419	303 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	CLIP4	Q8N3C7	705 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	HORMAD2	Q8N7B1	307 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	LMO3	Q8TAP4	145 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	C2CD4C	Q8TF44	421 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	APOLD1	Q96LR9	279 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	TRIM31	Q9BZY9	425 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	CDT1	Q9H211	546 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	RMI1	Q9H9A7	625 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	IL36RN	Q9UBH0	155 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032	LRCH1	Q9Y2L9	728 aa		4.1	□□□□□ -1.75
HMGN1-218	ENST00000490032		A0A1B0GUV1	79 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	C17orf102	A2RUQ5	167 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	FAM90A20P	A6NIJ5	464 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	IFITM10	A6NMD0	228 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	RNMT	O43148	476 aa	Known RBP	4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	DDAH2	O95865	285 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	PRSS2	P07478	247 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	CHN1	P15882	459 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	HTR3A	P46098	478 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	SEC61A1	P61619	476 aa	Known RBP	4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	RPS6KA2	Q15349	733 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	PUM3	Q15397	648 aa	Known RBP	4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	PRAMEF19	Q5SWL8	479 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	TANGO2	Q6ICL3	276 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	AADACL2	Q6P093	401 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	GALNT7	Q86SF2	657 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	VPS52	Q8N1B4	723 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	STT3B	Q8TCJ2	826 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	FAR1	Q8WVX9	515 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	KCNJ9	Q92806	393 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	DDX23	Q9BUQ8	820 aa	Known RBP	4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	SEPSECS	Q9HD40	501 aa	Known RBP	4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	SEL1L	Q9UBV2	794 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032	BAG5	Q9UL15	447 aa		4.09	□□□□□ -1.75
HMGN1-218	ENST00000490032		A0A0A0MQY5	61 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	ACKR2	O00590	384 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	HSPB6	O14558	160 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	FCGR1A	P12314	374 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	LYL1	P12980	280 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	AMT	P48728	403 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	CLCNKB	P51801	687 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	TMPRSS3	P57727	454 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	RPL36A	P83881	106 aa	Known RBP	4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	SYTL3	Q4VX76	610 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	PRSS57	Q6UWY2	283 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	TEX45	Q8NA69	505 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	ATG16L2	Q8NAA4	619 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	CEP76	Q8TAP6	659 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	SLC35F5	Q8WV83	523 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	C3orf49	Q96BT1	292 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	LMLN	Q96KR4	655 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	RMDN3	Q96TC7	470 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	CADM1	Q9BY67	442 aa	Known RBP	4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	ZNF556	Q9HAH1	456 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	KL	Q9UEF7	1012 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	PCDHGB1	Q9Y5G3	927 aa		4.08	□□□□□ -1.76
HMGN1-218	ENST00000490032	BTBD18	B2RXH4	712 aa		4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	ASAP2	O43150	1006 aa		4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	CCNT1	O60563	726 aa	Known RBP	4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	ENO3	P13929	434 aa	Predicted RBP	4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	ZNF12	P17014	697 aa		4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	AVPR2	P30518	371 aa		4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	THPO	P40225	353 aa		4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	PDLIM4	P50479	330 aa		4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	RPS6KA3	P51812	740 aa		4.07	□□□□□ -1.76
HMGN1-218	ENST00000490032	NUDT6	P53370	316 aa		4.07	□□□□□ -1.76

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