RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 PRKCIP41743 596 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 MAPKAPK2P49137 400 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 SERPINH1P50454 418 aaKnown RBP18.15■□□□□ 0.5
ITGB1-215ENST00000488494 CLCN6P51797 869 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 OGDHQ02218 1023 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 KLHL30Q0D2K2 578 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 TEAD4Q15561 434 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 EFHC2Q5JST6 749 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 FAM46CQ5VWP2 391 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 RETSATQ6NUM9 610 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 SCYL2Q6P3W7 929 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.15■□□□□ 0.5
ITGB1-215ENST00000488494 SLFN11Q7Z7L1 901 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 PIP4P1Q86T03 277 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 NLRP14Q86W24 1093 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 PYROXD2Q8N2H3 581 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 OR2A12Q8NGT7 310 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 PIP4K2CQ8TBX8 421 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 ORAI3Q9BRQ5 295 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 CNPY3Q9BT09 278 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 TNKS2Q9H2K2 1166 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 SLC32A1Q9H598 525 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 IL21RQ9HBE5 538 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 NDFIP2Q9NV92 336 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 DNAI1Q9UI46 699 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 FNDC3AQ9Y2H6 1198 aaKnown RBP18.15■□□□□ 0.5
ITGB1-215ENST00000488494 PLXNA2O75051 1894 aa18.15■□□□□ 0.5
ITGB1-215ENST00000488494 UPK3BL1B0FP48 263 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 UPK3BL2E5RIL1 263 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 ZMPSTE24O75844 475 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 CER1O95813 267 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 CTSLP07711 333 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 CD59P13987 128 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 RHOQP17081 205 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 DESP17661 470 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 PMLP29590 882 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 ACVRL1P37023 503 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 GRIA4P48058 902 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 PPP2CBP62714 309 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 PPP2CAP67775 309 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 ARF5P84085 180 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 CNTN1Q12860 1018 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 MAMLD1Q13495 774 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 FIGNQ5HY92 759 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 AGBL4Q5VU57 503 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 TMC6Q7Z403 805 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 GRIN3AQ8TCU5 1115 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 FAM131CQ96AQ9 280 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 VCPIP1Q96JH7 1222 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 SLC6A18Q96N87 628 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 EDEM3Q9BZQ6 932 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 GAREM1Q9H706 876 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 OSGEPQ9NPF4 335 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 PARVAQ9NVD7 372 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 TMEM248Q9NWD8 314 aa18.14■□□□□ 0.49
ITGB1-215ENST00000488494 FARP1Q9Y4F1 1045 aaPredicted RBP18.14■□□□□ 0.49
ITGB1-215ENST00000488494 ASCC3Q8N3C0 2202 aaKnown RBP18.14■□□□□ 0.49
ITGB1-215ENST00000488494 CHD8Q9HCK8 2581 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 A0A1W2PPC4 97 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 DDX3XO00571 662 aaKnown RBP eCLIP18.13■□□□□ 0.493e-13■■■■□ 23.1
ITGB1-215ENST00000488494 SLC7A4O43246 635 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 SKILP12757 684 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 ETFBP38117 255 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 UBASH3AP57075 661 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 KIF19Q2TAC6 998 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 HLA-BQ31612 363 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 IL27RAQ6UWB1 636 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 ADAT2Q7Z6V5 191 aaKnown RBP18.13■□□□□ 0.49
ITGB1-215ENST00000488494 CHST14Q8NCH0 376 aa18.13■□□□□ 0.49
ITGB1-215ENST00000488494 FCF1Q9Y324 198 aaKnown RBP18.13■□□□□ 0.49
ITGB1-215ENST00000488494 SPAARA0A1B0GVQ0 90 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 C10orf142B7Z368 130 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 KPNA3O00505 521 aaPredicted RBP18.12■□□□□ 0.49
ITGB1-215ENST00000488494 PLRG1O43660 514 aaKnown RBP18.12■□□□□ 0.49
ITGB1-215ENST00000488494 RAMP2O60895 175 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 FTLP02792 175 aaPredicted RBP18.12■□□□□ 0.49
ITGB1-215ENST00000488494 PSMA2P25787 234 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 EPHB2P29323 1055 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 L1CAMP32004 1257 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 CHRNA3P32297 505 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 PBX1P40424 430 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 RECQLP46063 649 aaPredicted RBP18.12■□□□□ 0.49
ITGB1-215ENST00000488494 CCR5P51681 352 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 SLC14A1Q13336 389 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 TDRD12Q587J7 1177 aaKnown RBP18.12■□□□□ 0.49
ITGB1-215ENST00000488494 PLEKHA7Q6IQ23 1121 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 NAXDQ8IW45 347 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 RTL3Q8N8U3 475 aaKnown RBP18.12■□□□□ 0.49
ITGB1-215ENST00000488494 ARHGEF2Q92974 986 aaKnown RBP18.12■□□□□ 0.49
ITGB1-215ENST00000488494 ZNF653Q96CK0 615 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 CAMK1GQ96NX5 476 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 EPAS1Q99814 870 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 ACE2Q9BYF1 805 aaPredicted RBP18.12■□□□□ 0.49
ITGB1-215ENST00000488494 CEP44Q9C0F1 390 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 EBF2Q9HAK2 575 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 AASDHPPTQ9NRN7 309 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 ANGPTL2Q9UKU9 493 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 FZD10Q9ULW2 581 aa18.12■□□□□ 0.49
ITGB1-215ENST00000488494 ANKRD6Q9Y2G4 727 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms