RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CD180Q99467 661 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 TRMOQ9BU70 441 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 NPLQ9BXD5 320 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 HIPK3Q9H422 1215 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 TTC12Q9H892 705 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 IL21RQ9HBE5 538 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 WASH6PQ9NQA3 447 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 HEY2Q9UBP5 337 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 ZNF70Q9UC06 446 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 COG5Q9UP83 839 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 AFG3L2Q9Y4W6 797 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 RPS6KL1Q9Y6S9 549 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 EEA1Q15075 1411 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 CENPJQ9HC77 1338 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 A0A1W2PPC1 479 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 OR6C68A6NDL8 312 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 SH2D7A6NKC9 451 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 HOXC11O43248 304 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 ZC3H11AO75152 810 aaKnown RBP eCLIP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 CNOT3O75175 753 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 IL1AP01583 271 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 CHRNB1P11230 501 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 HNF1BP35680 557 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 ME1P48163 572 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 ZNF81P51508 661 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 MAPK7Q13164 816 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 NAA25Q14CX7 972 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 INPP5JQ15735 1006 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 NFIL3Q16649 462 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 PIK3CD-AS1Q5SR53 167 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 VWA5B1Q5TIE3 1220 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 RETSATQ6NUM9 610 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 GJB7Q6PEY0 223 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 FAM185AQ8N0U4 392 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 ESX1Q8N693 406 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 FAR1Q8WVX9 515 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 HVCN1Q96D96 273 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 ZFYVE19Q96K21 471 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 FRG2BQ96QU4 278 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 EIF2AK1Q9BQI3 630 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 WDR83Q9BRX9 315 aaKnown RBP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 TAOK3Q9H2K8 898 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 FOXP1Q9H334 677 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 UNC45AQ9H3U1 944 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 TMEM160Q9NX00 188 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 ELOVL5Q9NYP7 299 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 IFT80Q9P2H3 777 aaPredicted RBP4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 CDH22Q9UJ99 828 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 HSF4Q9ULV5 492 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 ICKQ9UPZ9 632 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 TMEM98Q9Y2Y6 226 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 HS3ST3B1Q9Y662 390 aa4.17□□□□□ -1.74
ECHDC1-217ENST00000488087 A6NNC1 897 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 PPEF2O14830 753 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 TLX3O43711 291 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 GUCY1B2O75343 617 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 TMCC1O94876 653 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 HNRNPA1P09651 372 aaKnown RBP eCLIP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 TMEM191BP0C7N4 346 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 PRF1P14222 555 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 CD72P21854 359 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 PSMC2P35998 433 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 SLC16A2P36021 539 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 PTPN9P43378 593 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 MTNR1AP48039 350 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 ALDH7A1P49419 539 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 TDGQ13569 410 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 NAA35Q5VZE5 725 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 SLC22A25Q6T423 547 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 LRRC8DQ7L1W4 858 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 KDELC2Q7Z4H8 507 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 ADGRG6Q86SQ4 1221 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 WDR5BQ86VZ2 330 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 TMTC1Q8IUR5 882 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 SLC25A41Q8N5S1 370 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 ARFGAP1Q8N6T3 406 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 LRRC57Q8N9N7 239 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 DNAAF1Q8NEP3 725 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 HTRA1Q92743 480 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 VOPP1Q96AW1 172 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 TEFMQ96QE5 360 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 SEC62Q99442 399 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 SPAG4Q9NPE6 437 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 PNRC2Q9NPJ4 139 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 DECR2Q9NUI1 292 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 CNOT7Q9UIV1 285 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 TBX20Q9UMR3 447 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 CRYL1Q9Y2S2 319 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 RAP2CQ9Y3L5 183 aa4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 SETD1BQ9UPS6 1966 aaKnown RBP4.16□□□□□ -1.74
ECHDC1-217ENST00000488087 TARSL2A2RTX5 802 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 C17orf100A8MU93 164 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 ZNF814B7Z6K7 855 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 NDUFB8O95169 186 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 DDAH2O95865 285 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 CLCNKBP51801 687 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 TMPRSS3P57727 454 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 GPR68Q15743 365 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms