RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 HAUS4Q9H6D7 363 aa11.72□□□□□ -0.53
SPEN-205ENST00000487496 RETREG1Q9H6L5 497 aa11.72□□□□□ -0.53
SPEN-205ENST00000487496 EBF2Q9HAK2 575 aa11.72□□□□□ -0.53
SPEN-205ENST00000487496 NDFIP2Q9NV92 336 aa11.72□□□□□ -0.53
SPEN-205ENST00000487496 A0A1B0GVT2 93 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 A0A1W2PPC4 97 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 PLK4O00444 970 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 SLC7A4O43246 635 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 PTMSP20962 102 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 PRKCIP41743 596 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 GRIA4P48058 902 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 CCR5P51681 352 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 TPM4P67936 248 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 ARF5P84085 180 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 OGDHQ02218 1023 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 SLC20A2Q08357 652 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 ZNF252P-AS1Q0IIN9 211 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 SCAPQ12770 1279 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 MAMLD1Q13495 774 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 TEAD4Q15561 434 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 KIF19Q2TAC6 998 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 HLA-BQ31612 363 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 POM121L1PQ3SYA9 428 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 FIGNQ5HY92 759 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 RETSATQ6NUM9 610 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 PPP1R2P3Q6NXS1 205 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 SCYL2Q6P3W7 929 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 DCUN1D2Q6PH85 259 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 ZNF571Q7Z3V5 609 aaPredicted RBP11.71□□□□□ -0.53
SPEN-205ENST00000487496 SLFN11Q7Z7L1 901 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 NLRP14Q86W24 1093 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 OR2A12Q8NGT7 310 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 TBC1D31Q96DN5 1066 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 ACE2Q9BYF1 805 aaPredicted RBP11.71□□□□□ -0.53
SPEN-205ENST00000487496 GAREM1Q9H706 876 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 IL21RQ9HBE5 538 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 ATP13A1Q9HD20 1204 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 TMEM248Q9NWD8 314 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 DNAI1Q9UI46 699 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 NEU3Q9UQ49 428 aa11.71□□□□□ -0.53
SPEN-205ENST00000487496 LAMA1P25391 3075 aa11.71□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3DA0A087WVF3 549 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3IA0A087WXS9 549 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3EA0A087X179 549 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3KA0A087X1G2 549 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3FA6NER0 549 aaPredicted RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3LB9A6J9 549 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 C1QTNF3-AMACRE9PGA6 284 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 DDX3XO00571 662 aaKnown RBP eCLIP11.7□□□□□ -0.54
SPEN-205ENST00000487496 RTN2O75298 545 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 ZNF821O75541 412 aaPredicted RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 CER1O95813 267 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 CTSLP07711 333 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3HP0C7X1 549 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 GZMAP12544 262 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 SKILP12757 684 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 L1CAMP32004 1257 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 CHRNA3P32297 505 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 ACVRL1P37023 503 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 PBX1P40424 430 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 MAPKAPK2P49137 400 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 SERPINH1P50454 418 aaKnown RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 UBASH3AP57075 661 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 RACK1P63244 317 aaKnown RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 KLHL30Q0D2K2 578 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 CNTN1Q12860 1018 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 AGBL4Q5VU57 503 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3GQ6DHY5 549 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3CQ6IPX1 549 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 PLEKHA7Q6IQ23 1121 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 C22orf39Q6P5X5 142 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 LAYNQ6UX15 382 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 DNAAF5Q86Y56 855 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TBC1D3Q8IZP1 549 aaPredicted RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 PYROXD2Q8N2H3 581 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 CHST14Q8NCH0 376 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 ARHGEF2Q92974 986 aaKnown RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 CCDC114Q96M63 670 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 SLC6A18Q96N87 628 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 CEP44Q9C0F1 390 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TNKS2Q9H2K2 1166 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 KDM4CQ9H3R0 1056 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 PARVAQ9NVD7 372 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 TPX2Q9ULW0 747 aaKnown RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 ANKRD6Q9Y2G4 727 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 FNDC3AQ9Y2H6 1198 aaKnown RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
SPEN-205ENST00000487496 SNX11Q9Y5W9 270 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 DOCK4Q8N1I0 1966 aa11.7□□□□□ -0.54
SPEN-205ENST00000487496 KNL1Q8NG31 2342 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 CXorf51AA0A1B0GTR3 108 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 SPAARA0A1B0GVQ0 90 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 GOLGA6L19H0YKK7 550 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 RNF103O00237 685 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 KPNA3O00505 521 aaPredicted RBP11.69□□□□□ -0.54
SPEN-205ENST00000487496 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
SPEN-205ENST00000487496 LATO43561 262 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 PLRG1O43660 514 aaKnown RBP11.69□□□□□ -0.54
SPEN-205ENST00000487496 SH3BP5O60239 455 aa11.69□□□□□ -0.54
SPEN-205ENST00000487496 CD160O95971 181 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms