RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 LGMNQ99538 433 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 HINFPQ9BQA5 517 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 C8orf33Q9H7E9 229 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-229ENST00000486665 ATP13A1Q9HD20 1204 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 LTB4R2Q9NPC1 389 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 SPATA6Q9NWH7 488 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-229ENST00000486665 RNF14Q9UBS8 474 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 SLC27A6Q9Y2P4 619 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 MRFAP1Q9Y605 127 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 ACTL7AQ9Y615 435 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 RAD54BQ9Y620 910 aa13.06□□□□□ -0.32
HDAC6-229ENST00000486665 TICRRQ7Z2Z1 1910 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 ARHGAP42A6NI28 874 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 PRRT4C9JH25 899 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 LIASO43766 372 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 MAFKO60675 156 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 EIF2DP41214 584 aaKnown RBP13.05□□□□□ -0.32
HDAC6-229ENST00000486665 GARSP41250 739 aaKnown RBP13.05□□□□□ -0.32
HDAC6-229ENST00000486665 CTSOP43234 321 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-229ENST00000486665 OXCT1P55809 520 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 CSTF1Q05048 431 aaKnown RBP13.05□□□□□ -0.32
HDAC6-229ENST00000486665 SLC12A1Q13621 1099 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 PDK1Q15118 436 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 CCNG2Q16589 344 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 MBLAC2Q68D91 279 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 TPRG1Q6ZUI0 275 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 RALGPS2Q86X27 583 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-229ENST00000486665 ZNF354CQ86Y25 554 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 ZNF557Q8N988 423 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-229ENST00000486665 TTC13Q8NBP0 860 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 SLC35B2Q8TB61 432 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 SORCS1Q8WY21 1168 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 RUBCNQ92622 972 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 TTC17Q96AE7 1141 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 NAP1L3Q99457 506 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-229ENST00000486665 P2RY13Q9BPV8 354 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 IPO11Q9UI26 975 aaKnown RBP13.05□□□□□ -0.32
HDAC6-229ENST00000486665 VPS28Q9UK41 221 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 DNPEPQ9ULA0 475 aa13.05□□□□□ -0.32
HDAC6-229ENST00000486665 A0A0A0MRY4 1105 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 TBC1D3BA6NDS4 549 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-229ENST00000486665 H7C0C1 242 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 CBX4O00257 560 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 PRAMEF11O60813 436 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 KAT7O95251 611 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 CD160O95971 181 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 PEX11BO96011 259 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 MT-CO1P00395 513 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 RBP3P10745 1247 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 VAV1P15498 845 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 MX2P20592 715 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 ATP5OP48047 213 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 KCNJ1P48048 391 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 ARF5P84085 180 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 PRKCQQ04759 706 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 PPIDQ08752 370 aaKnown RBP13.04□□□□□ -0.32
HDAC6-229ENST00000486665 XRCC4Q13426 336 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 TUBB2AQ13885 445 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 DMC1Q14565 340 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 PON2Q15165 354 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 OASLQ15646 514 aaKnown RBP13.04□□□□□ -0.32
HDAC6-229ENST00000486665 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-229ENST00000486665 WHAMMP3Q1A5X7 153 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 TTC27Q6P3X3 843 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
HDAC6-229ENST00000486665 LINGO4Q6UY18 593 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 BZW1Q7L1Q6 419 aaKnown RBP13.04□□□□□ -0.32
HDAC6-229ENST00000486665 DGLUCYQ7Z3D6 616 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 ATPAF2Q8N5M1 289 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 TERB1Q8NA31 727 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 CCNYQ8ND76 341 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 WFIKKN2Q8TEU8 576 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 EZH1Q92800 747 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-229ENST00000486665 HDAC11Q96DB2 347 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 SHDQ96IW2 340 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 TUBB2BQ9BVA1 445 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 PDFQ9HBH1 243 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 RRAGDQ9NQL2 400 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-229ENST00000486665 VPS51Q9UID3 782 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 HCN2Q9UL51 889 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 F5P12259 2224 aa13.04□□□□□ -0.32
HDAC6-229ENST00000486665 HACD1B0YJ81 288 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 K7EQS6 105 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 PPP1R12AO14974 1030 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 MCF2LO15068 1137 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 NCAM2O15394 837 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 LAMTOR5O43504 91 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 APODP05090 189 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 POLR2EP19388 210 aaKnown RBP13.03□□□□□ -0.32
HDAC6-229ENST00000486665 CCNCP24863 283 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 RBL1P28749 1068 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 ETFBP38117 255 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 GRIA2P42262 883 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 NRLP54845 237 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 IL10RBQ08334 325 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 AP1B1Q10567 949 aa13.03□□□□□ -0.32
HDAC6-229ENST00000486665 PRKD1Q15139 912 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms