RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-208ENST00000486404 CREB3O43889 395 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 RAMP2O60895 175 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 LRIG2O94898 1065 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 ADRB1P08588 477 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 CSRP1P21291 193 aaKnown RBP13.18□□□□□ -0.3
CHMP3-208ENST00000486404 PRKCIP41743 596 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 SERPINH1P50454 418 aaKnown RBP13.18□□□□□ -0.3
CHMP3-208ENST00000486404 AIF1P55008 147 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 GEMIN4P57678 1058 aaKnown RBP13.18□□□□□ -0.3
CHMP3-208ENST00000486404 ZNF252P-AS1Q0IIN9 211 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 NR1I3Q14994 352 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 MANEALQ5VSG8 457 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-208ENST00000486404 ZNF571Q7Z3V5 609 aaPredicted RBP13.18□□□□□ -0.3
CHMP3-208ENST00000486404 DEFB124Q8NES8 71 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 PIP4K2CQ8TBX8 421 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 GRIN3AQ8TCU5 1115 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 PPP1R16AQ96I34 528 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 FAM129BQ96TA1 746 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 SYT11Q9BT88 431 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.18□□□□□ -0.3
CHMP3-208ENST00000486404 NEUROG2Q9H2A3 272 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 IFNKQ9P0W0 207 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 DNAI1Q9UI46 699 aa13.18□□□□□ -0.3
CHMP3-208ENST00000486404 A0A1B0GVT2 93 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 TCRBV5S1A1TA0A578 114 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 FAM72CH0Y354 149 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 K7ERQ8 282 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 TM4SF5O14894 197 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 MCF2LO15068 1137 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 SLC7A4O43246 635 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 MT-CO1P00395 513 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 FTLP02792 175 aaPredicted RBP13.17□□□□□ -0.3
CHMP3-208ENST00000486404 PRNPP04156 253 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 MYBL1P10243 752 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 SKILP12757 684 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 GLDCP23378 1020 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 EPHB2P29323 1055 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 GRIA4P48058 902 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 DNA2P51530 1060 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 GALCP54803 685 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 C21orf59P57076 290 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 FAM72AQ5TYM5 149 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 FAM72DQ6L9T8 149 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.17□□□□□ -0.3
CHMP3-208ENST00000486404 FAM72BQ86X60 149 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 SKA1Q96BD8 255 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 CEP44Q9C0F1 390 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 TNKS2Q9H2K2 1166 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 RETREG1Q9H6L5 497 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 CATSPERBQ9H7T0 1116 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 TM9SF3Q9HD45 589 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 AASDHPPTQ9NRN7 309 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
CHMP3-208ENST00000486404 TMEM248Q9NWD8 314 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 ZNF212Q9UDV6 495 aa13.17□□□□□ -0.3
CHMP3-208ENST00000486404 CNOT8Q9UFF9 292 aaKnown RBP13.17□□□□□ -0.3
CHMP3-208ENST00000486404 TPX2Q9ULW0 747 aaKnown RBP13.17□□□□□ -0.3
CHMP3-208ENST00000486404 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3DA0A087WVF3 549 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3IA0A087WXS9 549 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3EA0A087X179 549 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3KA0A087X1G2 549 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3FA6NER0 549 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3LB9A6J9 549 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 PLK4O00444 970 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 FGF10O15520 208 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 CBFA2T2O43439 604 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 SMAD6O43541 496 aaKnown RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 RTN2O75298 545 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 RNF8O76064 485 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 IGHV4-34P06331 123 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3HP0C7X1 549 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 GZMAP12544 262 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 CEACAM1P13688 526 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 L1CAMP32004 1257 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 CHRNA3P32297 505 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 CSNK1EP49674 416 aaKnown RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 METAP1P53582 386 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TPI1P60174 286 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 ZBED6P86452 979 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 CCDC15Q0P6D6 951 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 CNTN1Q12860 1018 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 POLD3Q15054 466 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 SLC45A4Q5BKX6 768 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3GQ6DHY5 549 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3CQ6IPX1 549 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 PLEKHA7Q6IQ23 1121 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 LAYNQ6UX15 382 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 NLRP14Q86W24 1093 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 TBC1D3Q8IZP1 549 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 PYROXD2Q8N2H3 581 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 RYBPQ8N488 228 aaPredicted RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 PCDH20Q8N6Y1 951 aaKnown RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 RTL3Q8N8U3 475 aaKnown RBP13.16□□□□□ -0.3
CHMP3-208ENST00000486404 OR2A12Q8NGT7 310 aa13.16□□□□□ -0.3
CHMP3-208ENST00000486404 CPLX3Q8WVH0 158 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms