RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 RTN2O75298 545 aa20■□□□□ 0.79
SNX5-213ENST00000486039 FSBPO95073 299 aa20■□□□□ 0.79
SNX5-213ENST00000486039 IGHV4-34P06331 123 aa20■□□□□ 0.79
SNX5-213ENST00000486039 SYPP08247 313 aa20■□□□□ 0.79
SNX5-213ENST00000486039 GOT1P17174 413 aa20■□□□□ 0.79
SNX5-213ENST00000486039 DRD3P35462 400 aa20■□□□□ 0.79
SNX5-213ENST00000486039 ATXN3P54252 364 aaPredicted RBP20■□□□□ 0.79
SNX5-213ENST00000486039 NCEH1Q6PIU2 408 aa20■□□□□ 0.79
SNX5-213ENST00000486039 TMC6Q7Z403 805 aa20■□□□□ 0.79
SNX5-213ENST00000486039 MINDY1Q8N5J2 469 aa20■□□□□ 0.79
SNX5-213ENST00000486039 DEFB124Q8NES8 71 aa20■□□□□ 0.79
SNX5-213ENST00000486039 CPLX3Q8WVH0 158 aa20■□□□□ 0.79
SNX5-213ENST00000486039 ACE2Q9BYF1 805 aaPredicted RBP20■□□□□ 0.79
SNX5-213ENST00000486039 RETREG1Q9H6L5 497 aa20■□□□□ 0.79
SNX5-213ENST00000486039 ATP13A1Q9HD20 1204 aa20■□□□□ 0.79
SNX5-213ENST00000486039 TMEM248Q9NWD8 314 aa20■□□□□ 0.79
SNX5-213ENST00000486039 DNAI1Q9UI46 699 aa20■□□□□ 0.79
SNX5-213ENST00000486039 FZD10Q9ULW2 581 aa20■□□□□ 0.79
SNX5-213ENST00000486039 MAP1BP46821 2468 aaKnown RBP20■□□□□ 0.79
SNX5-213ENST00000486039 PI4KAP42356 2102 aa20■□□□□ 0.79
SNX5-213ENST00000486039 NYNRINQ9P2P1 1898 aaKnown RBP19.99■□□□□ 0.79
SNX5-213ENST00000486039 FAM47DPA6NHR8 397 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 PLK4O00444 970 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 ALOX15BO15296 676 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 BNIP3LO60238 219 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 L1CAMP32004 1257 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 ACVRL1P37023 503 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 MAPKAPK2P49137 400 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 CLCN6P51797 869 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 ARF5P84085 180 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 GRIK2Q13002 908 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 EFHC2Q5JST6 749 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 KIAA0895LQ68EN5 471 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 ARFGAP1Q8N6T3 406 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 OR2A12Q8NGT7 310 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 SYN2Q92777 582 aaPredicted RBP19.99■□□□□ 0.79
SNX5-213ENST00000486039 FAM131CQ96AQ9 280 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 TRIM7Q9C029 511 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 ISCUQ9H1K1 167 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 CNOT8Q9UFF9 292 aaKnown RBP19.99■□□□□ 0.79
SNX5-213ENST00000486039 CAPN11Q9UMQ6 739 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 ACTL7AQ9Y615 435 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 ADAMTS9Q9P2N4 1935 aa19.99■□□□□ 0.79
SNX5-213ENST00000486039 TMEM191CA6NGB0 347 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 ZNF821O75541 412 aaPredicted RBP19.98■□□□□ 0.79
SNX5-213ENST00000486039 CD160O95971 181 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 GYPCP04921 128 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 CTSLP07711 333 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 PSMA2P25787 234 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 CD27P26842 260 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 ADPRHP54922 357 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 AIF1P55008 147 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 ZBED6P86452 979 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 BNC1Q01954 994 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 FOXC1Q12948 553 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 C22orf39Q6P5X5 142 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.98■□□□□ 0.79
SNX5-213ENST00000486039 DSG4Q86SJ6 1040 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 OR2T34Q8NGX1 318 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 OR14C36Q8NHC7 312 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 PIP4K2CQ8TBX8 421 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 ARHGEF2Q92974 986 aaKnown RBP19.98■□□□□ 0.79
SNX5-213ENST00000486039 XPO4Q9C0E2 1151 aaKnown RBP19.98■□□□□ 0.79
SNX5-213ENST00000486039 SLC32A1Q9H598 525 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 EBF2Q9HAK2 575 aa19.98■□□□□ 0.79
SNX5-213ENST00000486039 ASCC3Q8N3C0 2202 aaKnown RBP19.97■□□□□ 0.79
SNX5-213ENST00000486039 LRRC72A6NJI9 287 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 UPK3BL1B0FP48 263 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 UPK3BL2E5RIL1 263 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 RNF103O00237 685 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 OPHN1O60890 802 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 GJB3O75712 270 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 SERPINH1P50454 418 aaKnown RBP19.97■□□□□ 0.79
SNX5-213ENST00000486039 SLC20A2Q08357 652 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 SEMA3BQ13214 749 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 POM121L1PQ3SYA9 428 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 TDRD12Q587J7 1177 aaKnown RBP19.97■□□□□ 0.79
SNX5-213ENST00000486039 FAM46CQ5VWP2 391 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 RETSATQ6NUM9 610 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 CHST14Q8NCH0 376 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 ZNF653Q96CK0 615 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 IQCDQ96DY2 449 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 TNKS2Q9H2K2 1166 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 TM9SF3Q9HD45 589 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 OSGEPQ9NPF4 335 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 DNAAF2Q9NVR5 837 aaKnown RBP19.97■□□□□ 0.79
SNX5-213ENST00000486039 WASF3Q9UPY6 502 aa19.97■□□□□ 0.79
SNX5-213ENST00000486039 BZW2Q9Y6E2 419 aaKnown RBP19.97■□□□□ 0.79
SNX5-213ENST00000486039 A0A1B0GVT2 93 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 A0A1W2PPC4 97 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 C1QTNF3-AMACRE9PGA6 284 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 CREB3O43889 395 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 SERPING1P05155 500 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 EPHB2P29323 1055 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 CHRNA3P32297 505 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 CSNK1EP49674 416 aaKnown RBP19.96■□□□□ 0.79
SNX5-213ENST00000486039 CNTN1Q12860 1018 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 PIP4P1Q86T03 277 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 FNIP1Q8TF40 1166 aa19.96■□□□□ 0.79
SNX5-213ENST00000486039 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms