RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CTNNBL1Q8WYA6 563 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 HSPH1Q92598 858 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 ARHGEF2Q92974 986 aaKnown RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 CCDC42Q96M95 316 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 DNAJC7Q99615 494 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 SNRNP25Q9BV90 132 aaKnown RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 GTPBP2Q9BX10 602 aaKnown RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 TNKS2Q9H2K2 1166 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 C6orf106Q9H6K1 298 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 ZWILCHQ9H900 591 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 ABHD10Q9NUJ1 306 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 NDFIP2Q9NV92 336 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 EVLQ9UI08 416 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 ANAPC7Q9UJX3 599 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 HS3ST2Q9Y278 367 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3DA0A087WVF3 549 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3IA0A087WXS9 549 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3EA0A087X179 549 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3KA0A087X1G2 549 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3FA6NER0 549 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3LB9A6J9 549 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 MCF2LO15068 1137 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 ALOX15BO15296 676 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 FGF10O15520 208 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 SMAD6O43541 496 aaKnown RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 MFAP3LO75121 409 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 CYP1A2P05177 515 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 SYPP08247 313 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 H2AFZP0C0S5 128 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3HP0C7X1 549 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 CHRNA3P32297 505 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 MAPK8P45983 427 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 CCDC15Q0P6D6 951 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 SLC18A3Q16572 532 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 UAP1L1Q3KQV9 507 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 PPP6R3Q5H9R7 873 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 STPG1Q5TH74 334 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 DAB2IPQ5VWQ8 1189 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3GQ6DHY5 549 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3CQ6IPX1 549 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 C22orf39Q6P5X5 142 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 SARM1Q6SZW1 724 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 H2AFVQ71UI9 128 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TBC1D3Q8IZP1 549 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 PIP4K2CQ8TBX8 421 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 BTBD6Q96KE9 485 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 KCTD15Q96SI1 283 aaPredicted RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 PCED1AQ9H1Q7 454 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 TMEM9BQ9NQ34 198 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 RXFP3Q9NSD7 469 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 EIF2B4Q9UI10 523 aaKnown RBP12.78□□□□□ -0.36
PTCD1-205ENST00000485746 FZD4Q9ULV1 537 aa12.78□□□□□ -0.36
PTCD1-205ENST00000485746 MYO18AQ92614 2054 aaKnown RBP12.77□□□□□ -0.36
PTCD1-205ENST00000485746 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 A0A1B0GTW7 788 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 SSU72P8A0A1W2PR75 194 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 DCDC2BA2VCK2 349 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 C4orf47A7E2U8 309 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 RASA4BC9J798 803 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 H3BRJ5 948 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 KPNA3O00505 521 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 SLC30A4O14863 429 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 RASA4O43374 803 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 KDELR3O43731 214 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 LRCH4O75427 683 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 PRNPP04156 253 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 SERPINF2P08697 491 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ENGP17813 658 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 PCK1P35558 622 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ARL4AP40617 200 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 SERPINH1P50454 418 aaKnown RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 YBEYP58557 167 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ZNF252P-AS1Q0IIN9 211 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 CA9Q16790 459 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 HADHQ16836 314 aaKnown RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 BOLA3Q53S33 107 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 CARD16Q5EG05 197 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ARSIQ5FYB1 569 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ZFYVE27Q5T4F4 411 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ARTNQ5T4W7 220 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 KIAA0895LQ68EN5 471 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 SLC23A3Q6PIS1 610 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 NCEH1Q6PIU2 408 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ADAT2Q7Z6V5 191 aaKnown RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 PSTKQ8IV42 348 aaKnown RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ZCCHC9Q8N567 271 aaKnown RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 AADATQ8N5Z0 425 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ARFGAP1Q8N6T3 406 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 PCDH20Q8N6Y1 951 aaKnown RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 OR2T34Q8NGX1 318 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ARHGEF26Q96DR7 871 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 PPP1R16AQ96I34 528 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 PEBP4Q96S96 227 aa12.77□□□□□ -0.37
PTCD1-205ENST00000485746 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms