RNA–Protein interactions for RNA: ENST00000485402.5

TTC3-219, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,626 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-219ENST00000485402 PCDHA11Q9Y5I1 949 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 KIAA0100Q14667 2235 aaKnown RBP15.13■□□□□ 0.01
TTC3-219ENST00000485402 SCN1AP35498 2009 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 MAGEB3O15480 346 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 XRCC1P18887 633 aaPredicted RBP15.13■□□□□ 0.01
TTC3-219ENST00000485402 CDH5P33151 784 aaPredicted RBP15.13■□□□□ 0.01
TTC3-219ENST00000485402 SOX4Q06945 474 aaPredicted RBP15.13■□□□□ 0.01
TTC3-219ENST00000485402 LPIN1Q14693 890 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 MYLK3Q32MK0 819 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 TMEM198Q66K66 360 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 TRIM74Q86UV6 250 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 TRIM73Q86UV7 250 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 METTL25Q8N6Q8 603 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 TRIML2Q8N7C3 387 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 SORT1Q99523 831 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 CHCHD3Q9NX63 227 aaKnown RBP15.13■□□□□ 0.01
TTC3-219ENST00000485402 PHF24Q9UPV7 400 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 VILLO15195 856 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 DNAJA2O60884 412 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 GSRP00390 522 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 HNRNPCP07910 306 aaKnown RBP eCLIP15.13■□□□□ 0.012e-6■■□□□ 12
TTC3-219ENST00000485402 GLRBP48167 497 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 PRMT2P55345 433 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 SLC10A2Q12908 348 aaPredicted RBP15.13■□□□□ 0.01
TTC3-219ENST00000485402 MYBPC3Q14896 1274 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 TAZQ16635 292 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 ALKAL1Q6UXT8 129 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 PLD6Q8N2A8 252 aaKnown RBP15.13■□□□□ 0.01
TTC3-219ENST00000485402 BHLHE22Q8NFJ8 381 aaPredicted RBP15.13■□□□□ 0.01
TTC3-219ENST00000485402 NCSTNQ92542 709 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 COPG2Q9UBF2 871 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 TSPAN16Q9UKR8 245 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 SORCS3Q9UPU3 1222 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 RPS6KL1Q9Y6S9 549 aa15.13■□□□□ 0.01
TTC3-219ENST00000485402 SF3B1O75533 1304 aaKnown RBP eCLIP15.13■□□□□ 0.013e-7■■■■■ 46.9
TTC3-219ENST00000485402 H3BNX3 289 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 PCSK6P29122 969 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 GPD2P43304 727 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 THOP1P52888 689 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 MGAT3Q09327 533 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 STILQ15468 1287 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 PABPC1LQ4VXU2 614 aaKnown RBP15.12■□□□□ 0.01
TTC3-219ENST00000485402 FSCBQ5H9T9 825 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 C9orf57Q5W0N0 161 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 PGM2L1Q6PCE3 622 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 CATSPER2Q96P56 530 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 NUF2Q9BZD4 464 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 MGEA5O60502 916 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 CKBP12277 381 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 NDST1P52848 882 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 ART3Q13508 389 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 ZBTB6Q15916 424 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 CCDC14Q49A88 953 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 ADGRG6Q86SQ4 1221 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 LHX5Q9H2C1 402 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 ZDHHC7Q9NXF8 308 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 ADA2Q9NZK5 511 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 DCDC2Q9UHG0 476 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.12■□□□□ 0.01
TTC3-219ENST00000485402 C2CD4BA6NLJ0 364 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 TMCC1O94876 653 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 CHRNGP07510 517 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 MX2P20592 715 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 ZNF534Q76KX8 674 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 KBTBD6Q86V97 674 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 OR6B3Q8NGW1 331 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 RCN3Q96D15 328 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 LPIN3Q9BQK8 851 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 BCO2Q9BYV7 579 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 CAAP1Q9H8G2 361 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 TCF7L2Q9NQB0 619 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 PSMD13Q9UNM6 376 aa15.12■□□□□ 0.01
TTC3-219ENST00000485402 SMIM18P0DKX4 95 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 BOLA3Q53S33 107 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 TDRD5Q8NAT2 981 aaKnown RBP15.11■□□□□ 0.01
TTC3-219ENST00000485402 PRICKLE1Q96MT3 831 aaPredicted RBP15.11■□□□□ 0.01
TTC3-219ENST00000485402 APOL2Q9BQE5 337 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 TMCO1Q9UM00 188 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 THSD7BQ9C0I4 1608 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 XPOTO43592 962 aaKnown RBP15.11■□□□□ 0.01
TTC3-219ENST00000485402 PDGFRBP09619 1106 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 SH2D4BQ5SQS7 431 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 NAPRTQ6XQN6 538 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 PYROXD2Q8N2H3 581 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 COLGALT1Q8NBJ5 622 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 ITFG2Q969R8 447 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 MCRS1Q96EZ8 462 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 SCYL1Q96KG9 808 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 MRPL45Q9BRJ2 306 aaKnown RBP15.11■□□□□ 0.01
TTC3-219ENST00000485402 TSEN34Q9BSV6 310 aaKnown RBP15.11■□□□□ 0.01
TTC3-219ENST00000485402 CCDC28BQ9BUN5 200 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 ZNF711Q9Y462 761 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 HCRTO43612 131 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 ATP9BO43861 1147 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 POMCP01189 267 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 IGFBP6P24592 240 aaPredicted RBP15.11■□□□□ 0.01
TTC3-219ENST00000485402 SCNN1GP51170 649 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 HSP90AA5PQ58FG0 334 aa15.11■□□□□ 0.01
TTC3-219ENST00000485402 CDKL3Q8IVW4 592 aaPredicted RBP15.11■□□□□ 0.01
TTC3-219ENST00000485402 DNAAF3Q8N9W5 541 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms