RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 COPAP53621 1224 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 ARF5P84085 180 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 ZBTB16Q05516 673 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 ZNF662Q6ZS27 426 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 ARHGAP12Q8IWW6 846 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 SYCE1Q8N0S2 351 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 LRRC57Q8N9N7 239 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 PCDH19Q8TAB3 1148 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 CASKIN2Q8WXE0 1202 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 PRCCQ92733 491 aaPredicted RBP17.1■□□□□ 0.33
SF1-215ENST00000482693 PTPRN2Q92932 1015 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 ISG20Q96AZ6 181 aaKnown RBP17.1■□□□□ 0.33
SF1-215ENST00000482693 ERLEC1Q96DZ1 483 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 SIPA1Q96FS4 1042 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 CELF6Q96J87 481 aaKnown RBP17.1■□□□□ 0.33
SF1-215ENST00000482693 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 MKRN2Q9H000 416 aaKnown RBP17.1■□□□□ 0.33
SF1-215ENST00000482693 RSPH9Q9H1X1 276 aaPredicted RBP17.1■□□□□ 0.33
SF1-215ENST00000482693 GOLPH3Q9H4A6 298 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 MTG2Q9H4K7 406 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 ETNK2Q9NVF9 386 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 KLHL11Q9NVR0 708 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 R4GN57 208 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 WDFY4Q6ZS81 3184 aa17.1■□□□□ 0.33
SF1-215ENST00000482693 MYO18AQ92614 2054 aaKnown RBP17.09■□□□□ 0.33
SF1-215ENST00000482693 A0A0U1RQJ8 604 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 GRID2IPA4D2P6 1211 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 C3orf70A6NLC5 250 aaPredicted RBP17.09■□□□□ 0.33
SF1-215ENST00000482693 K7ERQ8 282 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 SMAD6O43541 496 aaKnown RBP17.09■□□□□ 0.33
SF1-215ENST00000482693 HRO43593 1189 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 ZNF217O75362 1048 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 KRT1P04264 644 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 ELAVL3Q14576 367 aaKnown RBP17.09■□□□□ 0.33
SF1-215ENST00000482693 INO80DQ53TQ3 878 aaPredicted RBP17.09■□□□□ 0.33
SF1-215ENST00000482693 DSG4Q86SJ6 1040 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 LRRC49Q8IUZ0 686 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 KATNAL2Q8IYT4 538 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 RCOR2Q8IZ40 523 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 NPWQ8N729 165 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 UBE2Q2Q8WVN8 375 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 GAB3Q8WWW8 586 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 RNF157Q96PX1 679 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 FAM129BQ96TA1 746 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 MAK16Q9BXY0 300 aaKnown RBP17.09■□□□□ 0.33
SF1-215ENST00000482693 TPSD1Q9BZJ3 242 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 TRIM10Q9UDY6 481 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 FARP1Q9Y4F1 1045 aaPredicted RBP17.09■□□□□ 0.33
SF1-215ENST00000482693 MUC22E2RYF6 1773 aaPredicted RBP17.09■□□□□ 0.33
SF1-215ENST00000482693 CACNA1HO95180 2353 aa17.09■□□□□ 0.33
SF1-215ENST00000482693 DFFAO00273 331 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 ALOX15BO15296 676 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 PRAMEF11O60813 436 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 RPP40O75818 363 aaKnown RBP17.08■□□□□ 0.32
SF1-215ENST00000482693 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.321e-6■■■□□ 14.8
SF1-215ENST00000482693 CD160O95971 181 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 ACADMP11310 421 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 CTNNA1P35221 906 aaKnown RBP17.08■□□□□ 0.32
SF1-215ENST00000482693 NHLH1Q02575 133 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 PAFAH1B3Q15102 231 aaKnown RBP17.08■□□□□ 0.32
SF1-215ENST00000482693 ZNF776Q68DI1 518 aaPredicted RBP17.08■□□□□ 0.32
SF1-215ENST00000482693 C22orf39Q6P5X5 142 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 KIAA1324Q6UXG2 1013 aaKnown RBP17.08■□□□□ 0.32
SF1-215ENST00000482693 PLPP6Q8IY26 295 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 STK40Q8N2I9 435 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 PCDH20Q8N6Y1 951 aaKnown RBP17.08■□□□□ 0.32
SF1-215ENST00000482693 SLC6A17Q9H1V8 727 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 ITM2CQ9NQX7 267 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 GUCA1BQ9UMX6 200 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 SCML1Q9UN30 329 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 MFHAS1Q9Y4C4 1052 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 PCDHA3Q9Y5H8 950 aa17.08■□□□□ 0.32
SF1-215ENST00000482693 CCDC66A2RUB6 948 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 MCF2LO15068 1137 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 ZNF821O75541 412 aaPredicted RBP17.07■□□□□ 0.32
SF1-215ENST00000482693 PALMO75781 387 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 VAV1P15498 845 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 ZFXP17010 805 aaPredicted RBP17.07■□□□□ 0.32
SF1-215ENST00000482693 CTNNA2P26232 953 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 P2RY2P41231 377 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 RECQLP46063 649 aaPredicted RBP17.07■□□□□ 0.32
SF1-215ENST00000482693 RPS14P62263 151 aaKnown RBP17.07■□□□□ 0.32
SF1-215ENST00000482693 IL10RBQ08334 325 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 SFSWAPQ12872 951 aaKnown RBP17.07■□□□□ 0.32
SF1-215ENST00000482693 TAZQ16635 292 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 MAP7D1Q3KQU3 841 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 Q6ZVU0 165 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 PEX26Q7Z412 305 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 PQLC3Q8N755 202 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 OR2A12Q8NGT7 310 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 EXD1Q8NHP7 514 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 OR8D1Q8WZ84 308 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 RNF25Q96BH1 459 aaPredicted RBP17.07■□□□□ 0.32
SF1-215ENST00000482693 RBM41Q96IZ5 413 aaKnown RBP17.07■□□□□ 0.32
SF1-215ENST00000482693 SPACA7Q96KW9 195 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 EPC1Q9H2F5 836 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 PDFQ9HBH1 243 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 FAM86C1Q9NVL1 165 aa17.07■□□□□ 0.32
SF1-215ENST00000482693 UBA2Q9UBT2 640 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms