RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 TPSAB1Q15661 275 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 FAM83EQ2M2I3 478 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 UGT2A3Q6UWM9 527 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 ILDR2Q71H61 639 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 PIGZQ86VD9 579 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 AFAP1L2Q8N4X5 818 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 OR9I1Q8NGQ6 314 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 SPATA22Q8NHS9 363 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 NXNL1Q96CM4 212 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 ZNF512Q96ME7 567 aaPredicted RBP12.92□□□□□ -0.34
VPS52-218ENST00000482399 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 SMARCAD1Q9H4L7 1026 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 RRN3Q9NYV6 651 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 MOCS1Q9NZB8 636 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 MID2Q9UJV3 735 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 STAP1Q9ULZ2 295 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 CSADQ9Y600 493 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 NR5A2O00482 541 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 CCL22O00626 93 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 HUS1O60921 280 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 RNASEH2AO75792 299 aaKnown RBP12.92□□□□□ -0.34
VPS52-218ENST00000482399 DDHD2O94830 711 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 MYL4P12829 197 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 UGT1A6P19224 532 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 STT3AP46977 705 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 PHEXP78562 749 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 FASTKQ14296 549 aaKnown RBP12.92□□□□□ -0.34
VPS52-218ENST00000482399 ZNF618Q5T7W0 954 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 OTOP3Q7RTS5 596 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 KBTBD6Q86V97 674 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 LPGAT1Q92604 370 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 APBB2Q92870 758 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 NAT9Q9BTE0 207 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 CXCL16Q9H2A7 254 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 POMKQ9H5K3 350 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 WARS2Q9UGM6 360 aaKnown RBP12.92□□□□□ -0.34
VPS52-218ENST00000482399 NUDT5Q9UKK9 219 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 TIMM44O43615 452 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 NR2C2P49116 596 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 NR1H2P55055 460 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 PRKAA1Q13131 559 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 SEMA5AQ13591 1074 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 PAN2Q504Q3 1202 aaKnown RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 OFCC1Q8IZS5 231 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 REPS2Q8NFH8 660 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 BEST2Q8NFU1 509 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 EMID1Q96A84 441 aaPredicted RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 ZFRQ96KR1 1074 aaKnown RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 QKIQ96PU8 341 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS52-218ENST00000482399 GMLQ99445 158 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 PTTG2Q9NZH5 202 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 DSEQ9UL01 958 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 TMCO1Q9UM00 188 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 OTUD3Q5T2D3 398 aaPredicted RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 ZNF470Q6ECI4 717 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 CATSPERGQ6ZRH7 1159 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 CHST15Q7LFX5 561 aaPredicted RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 GPR141Q7Z602 305 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 HERC6Q8IVU3 1022 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 FSTL5Q8N475 847 aaPredicted RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 METTL25Q8N6Q8 603 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 BTBD9Q96Q07 612 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 RBBP8Q99708 897 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 FTHL17Q9BXU8 183 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 MRPS26Q9BYN8 205 aaKnown RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 MRPL46Q9H2W6 279 aaKnown RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 PLEKHA5Q9HAU0 1116 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 MORF4L1Q9UBU8 362 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 TNFSF13BQ9Y275 285 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 MYRFQ9Y2G1 1151 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 RAP2CQ9Y3L5 183 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 BTAF1O14981 1849 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 KIF13BQ9NQT8 1826 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 SOWAHBA6NEL2 793 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 UBDO15205 165 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 XPOTO43592 962 aaKnown RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 HBP1O60381 514 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 MT-CYBP00156 380 aaPredicted RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 STMN1P16949 149 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 CXCR3P49682 368 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 IL1RL1Q01638 556 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 TUBB3Q13509 450 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 CLEC6AQ6EIG7 209 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 EPGNQ6UW88 154 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 NT5DC4Q86YG4 428 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 LILRA2Q8N149 483 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 NAT16Q8N8M0 369 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 DDI1Q8WTU0 396 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 OSMRQ99650 979 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 RSL24D1Q9UHA3 163 aaKnown RBP12.91□□□□□ -0.34
VPS52-218ENST00000482399 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
VPS52-218ENST00000482399 E7ENX8 843 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 MRASO14807 208 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 HSPA8P11142 646 aaKnown RBP12.9□□□□□ -0.34
VPS52-218ENST00000482399 NR4A1P22736 598 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 EPHX2P34913 555 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 SLC7A2P52569 658 aa12.9□□□□□ -0.34
VPS52-218ENST00000482399 MYBPC1Q00872 1141 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms